Transcript | Ll_transcript_304132 |
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CDS coordinates | 97-4575 (+) |
Peptide sequence | MGTRYTLAGKEVPITGSDAVRWIELSIPSSPNIAVDGAAAPLAPLTTDDRASCFVTDNPASYLLWRIHQTQPHALELLELDASKEIPKVGLRFNFPVALCPFAFICKNQITTGSSIYPYSLYVLTVTGVAYLLKIRKVSVYASSSSTILPVDELLELDLKDYIPYNVTITAIAATTGCLVIGRSDGSVFCFQLGGLDPSAPGFVHELRDEAGISRLWGLMSRGKPVGTVQDMVISDLDGKRFVFVLHLDGTLRIWDLVSYNRVFNHTMAGAMFLRLWVGQYNPDSSTFLLAILYRDTLDENLEMISLHSIQLNFGDRIVFSMEPPVKNIPLDEGRCLDAKLTMDKLWILKDDELISHTFSTNIDELEALSYALQEEFVADQLFQSSEHLADEIMRIGHSIFSSSKDDILPFVSSIFLRKLLLPGVHHNAALHATLVEYGRHLVESELQTLTADGLKKEILSLIEHEVGAGKVSTLCCWKSFFTRYFHNWCKSNAVYGLLADSSVGAVGLIRKSSVSLFRSLEDIERILEGSSDEVGALTGIVDLFDDDHDCEILTELLRCVISFSQQLGKTASSIFYESLLTAPAISSDDIIRCIVKILQTGYCISSSVIAGDSLVVLDNELADHKSLRKLSVDMFLTLQGLYKKASTWGRILDVIEGFLKFLVPRKITHNFDTEMPSNINSSIAVHTTYQIAEVMFESAWDFLLFLSYLVDISGQVHLSHDDITRIQLELVPMLEENIFEWLIIIFFSITPSAPAAIEDFNFKLSSLQIDGNMGKRLWNEKLGQCDFTLAFIFFLNAGSSSADHNHFYSERFSNMQSFINRTRDFISWIIWGQAGGSSTFLSRSIDLAFILFKHGQYGAAEQLLMMGETHLLKERTSQSIQDADGGWCIRHHLIGCCLLAQVQCGLHATQKDKKVYDAIRCFFRSSSGNGASEALQSLPDDIGIPFLGFSGCESSAAWRLQYYQWAMQLFERYNISEGACQFALAALEQVDEALCRKDEKFMSNSVDESMTIKGRLWANVFKFALDLCRYYDAYCAIISNPDEESKYICLRRFIIVLYEQGAIKILCRNKIPLIGLVEKVEQELAWKAERSDISAKPNLYKLLYAFQMNQHNWGRAANYMYLYSARLRTEAALKDHQGGSLMLQERLNALSAAVNALHLVHPAYAWIDPPSEGSSALSEHYPSKKARITPDEHSDNDFESQSWKPSIDIEKLENEFVLTSAEYMLSLVNVKWTFNGKHGALSDLADLLVQNNLYDMAFTIVLRFFKGSGLKRELERVLSAMSLTCCVDKVESTRVEEHGHFLTSSKLEMVVHGSPVTGPTTPQTDRNSFWAALKLYLEKYKEYHGRLPVIVAETLLRTDPQIELPLWLVQLFKEGQRERMWGMTGRESNPASLFQLYVNYGRYAEATHLLLESIESFASTRPADIIRRKRPFAVWFPYTTIERLLYQLEELIKLGHMVDQCNKLKKMLHGSLQNHLKTLKVDSDDAISASS* |
ORF Type | complete |
Blastp | Nuclear pore complex protein NUP160 from Arabidopsis with 46.9% of identity |
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Blastx | Nuclear pore complex protein NUP160 from Arabidopsis with 46.88% of identity |
Eggnog | Nucleoporin 160kDa(ENOG410YYM5) |
Kegg | Link to kegg annotations (AT1G33410) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461186.1) |
Pfam | Nucleoporin Nup120/160 (PF11715.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer