Transcript | Ll_transcript_339313 |
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CDS coordinates | 1170-3479 (+) |
Peptide sequence | MFEQRSLSKNNINAIRRSQVPQVVDTLWHLQSRDMLPAVWFIFSRKGCDAAVQYLEDCRLLDDCETSEVELALKRFRIQYPDAVRETAVRGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRSDSGHVYLSSNELLQMAGRAGRRGIDERGHVVLIQTPNDGAEEGCKVLFAGLEPLVSQFTASYGMVLNLLSGVKAIRSNEPDEVRPSSGRTLEEARKLVEQSFGNYVSSNVMLAAKEEIKKIKKEIELLMSEITDEAIDRKSRKALSQWEYNEITELQENLRAEKRVRSELRKQMEAKRISALKPILEDPEREHLPFLCLQYRDSEGVQHSIPAAYLGKVDSLNASKLKIMISSDDSFALNFLDEEPTGVTDSSLNKNLELSYHVALGSDNSWYLFTENWIKAVYGTGFPNVPLAQGDALPREIMSTLLDKEEMKWDKVAQSEHGGLWFVDGSLETWSWSLNVPVLSSLSENDELLLKSQVYQDAVELYKNQRTKVARLKKKVSRTGGYKEYNKIIDAVKFTEEKIKRLKTRSKRLSNRIEQIEPAGWKEFMHVSNVIHETRALDINTHAIFPLGQTAAAIRGENELWLAMVLRNKSLLELKPAQLAAVCASLVSEGIKVRPWKNNSYIYEPSATVVNFIRLLDEQRKVLMSIQDKHDVTISCCLDSQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPKLTDIDPLLQRNAKVAYDFMDRPPISELAG* |
ORF Type | complete |
Blastp | DExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 68.37% of identity |
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Blastx | DExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 67.12% of identity |
Eggnog | helicase(COG4581) |
Kegg | Link to kegg annotations (AT1G70070) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445516.1) |
Pfam | Helicase conserved C-terminal domain (PF00271.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer