Transcript | Ll_transcript_285889 |
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CDS coordinates | 197-2293 (+) |
Peptide sequence | MAQSSDSNSVPNRRLPCDSDGVCMLCKTKPTAVVDTLTCNTCITPWHLPCLPLPDRPPTMSDAQNWCCPDCAAPAAVTHPLPHPSSDDPSSQLMASIRAIQEDDSLTDQQKAKKRMEIMLASSNIADSSNPSSSAPPGVNAALDIFDGSFNCSICMQLPERPVTTPCGHNFCLKCFQKCFSQGNRTCANCRGAIPLKMATNPRINSQLAFAIRLAKMARSGCAVPAGVPKVYHFIHNQDRPDTAFTTERAKKTGLANACSGKIFVTVPPDHFGPIPAENDPTRNRGVLVGDTWMNRMDCRQWGAHLPHVAGIAGQSAYGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKNQSFDQQFENMNEALRLSCLKGYPVRVVRSSKEKRSAYAPDEGVRYDGVYRIEKCWRKVGQQGCKVCRYLFVRCDNEPAPWTSDECGDKPRPLPKIKELQGAVDLTERKAAPSWDFDGEKGCWLWKRPPPESKKSAGTVSPVKGQIRAVKRKVKVASVKDKLLKEFACQICRKVMCNPLTTPCAHNFCKACLEGAFSGQSFIRKRAVQSGRSLRAQKNVMKCPSCQNDIAEYLQNPQVNRQMMGIIESLQSEAEQLAENSSESSDKNDENQKNESDVSEPCEEEEDGDDDDDSSEKVLEEVKDNDLNLPPQKRRKVAKGAVVVTEEEHIDEVEQDSVKACA* |
ORF Type | complete |
Blastp | E3 ubiquitin-protein ligase ORTHRUS 2 from Arabidopsis with 60.71% of identity |
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Blastx | E3 ubiquitin-protein ligase ORTHRUS 2 from Arabidopsis with 60.66% of identity |
Eggnog | ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase(COG3440) |
Kegg | Link to kegg annotations (AT1G57820) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435773.1) |
Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer