Transcript | Ll_transcript_452301 |
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CDS coordinates | 102-4763 (+) |
Peptide sequence | MTDEESPTTATATGRRRARGPEASARSEALERLKARLRGGRRSDDGGPQIRLENPIYDTVPEDEYNALVAKRREQAQSFIVDDDGLGYGDEGEEEDWSKAGFTLSDESDGEFERPKRKKVEKKDPQTKRASASSASLSAAASIMGANRLSSMFTSSVFKKRDDKSCDSIVDDVIAEFAPDENDRQRRRRVQLNSVSTESGASEAIRINSAFSEKPLIGDSTDSIRGHTVANRDAESVRVVKNTNSSDLGLEKNYDTIKENVSCVEDGKDFSSENGESSIEQVQPNGNLVEEKVTKEIEVERKPATKNEVFTLNAKVSKEADQGLSATADWKALKSGGVENIVADSKVAREASNAEQNSEFNLDKDGLLPFYLLDAYEEFKGVNAGTVYLFGKVKAGNMYQSCCIIAKNIHRCVYAIPTHPLHYTDEIIKLEKDVQESQISSADFNKKLQDAVSGLKNEITKHLLDLNVSTFTMAPVKRKYAFEHSEIPAGENYVVKINYPFKDPELPVNLRGESFCALLGTQCSALELLLIKRKIKGPSWLHISNFSTPTASQRVSWCKSEVIVDSPKDIKIPASSKTPPEIPPVVVTAINLKTTINEKQDINEIVSASIVSCNRVKIDTPMLASEWKRAEMLTHFTVVRKLDGTIFPLGFSKEVTDRNTKARSNVLFVESSERALLNRLMIELHKLDSDVLVGHNISGFDLDVLLHRSQALKVPPRFWSKLGRLNRSVMPKLDRKYKGSGASHGIMSCIAGRLLCDTYLSSRELLKEVSYSLTQLAKTQLNMVRREVAPHDIPKKFQSAESLMELIEYGETDAVLSMELMFHLCVLPLTRHLTNISGNMWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKVSVYAKETKLPKRRAPNGVDDSNFDEADIDDANYDNVAGNGDNKKSKKTSSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSSKTTGVLPELLRNLVERRRMVKSWMKKESGLKLQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIAKSKAMAGKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKNGTPYEVIERKGLDIVRRDWSLLAKEVGDFCLSQILSGGSCEDVVESIHNHLMKVQEEMRSGDVPLEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYSSGCSVNDTIPYIICNEQGGSSGSATGIAQRARHPDELKQEQEKWMIDIEYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFQHKSSEALSDDPTSSLLFSADDEERYRGCEPLVLSCPSCSGTFDCPPVFKSICLLGSGKPTNPGMEDSNYNFWHKLQCSKCPEEGGAGRISPAMLANQVKRQAEKFVSLYYKGLLMCDDETCKHTTRTINLRSVGDSERGTVCPNYPRCNGHLHRKYTEADLYKQLSYFYHVLDTVSGIEKMETKSRIPVEKELMKLRPVVDMAASTIQGIRDRCAYGWVKLHDLVITAD* |
ORF Type | complete |
Blastp | DNA polymerase alpha catalytic subunit from Oryza sativa with 61.82% of identity |
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Blastx | DNA polymerase alpha catalytic subunit from Oryza sativa with 61.63% of identity |
Eggnog | DNA polymerase(COG0417) |
Kegg | Link to kegg annotations (4325052) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421313.1) |
Pfam | DNA polymerase alpha subunit p180 N terminal (PF12254.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer