Transcript | Ll_transcript_292657 |
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CDS coordinates | 2-4063 (+) |
Peptide sequence | FIIRSFSLSSAAFLSDFKTLIFSLCTFSLNLLTNQHTFLPLSLMATEEKENPYEGLGTGGKFRKRPFRRTQTTPYDRPSNSLRNPTINNNNNKKGWFSKVVDPAHRLISYSAHSLFSSLFRKRLPPPQSNASSSGVEIEQDVRVSHQEETVFVSNNFSGKQQGAVGNGESGAQINSSDGGTLTELEKLLGQKTFTRSEIDHLTALMRSRTVDAPMREEEKRTEVVPSEAILSSERKDEGPKTPIVQNRVENHLALTPYVTSRVPSEDIASPAELAKAYMGSRPSKVFSSMLSGQSPAAREGPAFLNSDDNLPLKSPIMSIVPRTVRHAGVHENGFANPRNRGRSAIYSMARTPYARIYPTSTLKGVGHAEGEPSSSTHSTLDHDMLYGSKQGSVKRRSSALDNDVGSVGPIRRIRHKANLYSKGSGLPPSGSSLSIARSGLGVGAPQQPSSSMRKPIMWDEVKHSHMDLPEENVQDTRPSKSGPLPSKSSEMASKILQQLDKMVSPKEKSSESRLPNVNDKSSTKLSPSMLHGQTLRSMEAVDSSKSLDTVKDNRFNIAPGKLSDSAQKLASQIDKVENGHLKLLAPSDGLVPSVTNADSRNPRNQTNSAAKSVDSFVVKSASYPPQKKRAFHMSAQEDCLDMDDDAYSNGDMSSVLPVDNKMTSPNAMTVKDTFGTESVAQENTRSLSAVMASKSSTISEEAHDRTDDNADGSRVGAKVDVSTSLTSSISDPTFKPATATTRTSFGSHKSASPNGSSAIPPVFNFEPSKDITNSGTIFGLEKVVSSKGLDADVPLVNFGSIGNAGKVPQMLFTSSPVVGESTLPNSGASSDSKLGSSISSATVSAATDSMPKVRESGNVDAKTNIDSVKPSEIPVSSAVTTSLFTPPTSAFTFGQSNGSLAASSSLSSPFTSQNVFSSSPLAASSSSISANSTSSIISSSSSSFSNPLVASSSSMTSSFKFGSSIVPSTGLPVSSSVSEPVETKNREVVGNGNLSSTVFGSSSSAVGNTGSGLFGFSSSATTSQSQGSVIGSSSGSMFTAQASPATSGFATSTQTQSVPLGSSSSSSFFGLTGNTSFSSGNSLFPSTPATNAGFSFGSSSFPSSSSATNIFNSGTTFGFGTPASSSAVNSVSSNNVSSSSLFGSSSWQPRESSPFGSAFNQTSTASVASTSSPTMFSSTPQFSFTSAATTTSTQPTFGNPNSPFTFGSAPVNNDQMTTEDSMAEDTVQATPPATPVFGQQATPPATPIFGQQATPPATAVFGQQATPSATPVFGQQSTPVQSNFVFGASTTSGANPFQFASQQNTTPPNASPFQASGSVEFSAGGGSFSLGTGGGDKSGRRIVKVKGRQRKR* |
ORF Type | 5prime_partial |
Blastp | Nuclear pore complex protein NUP1 from Arabidopsis with 40.68% of identity |
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Blastx | Nuclear pore complex protein NUP1 from Arabidopsis with 40.1% of identity |
Eggnog | nuclear pore complex protein(ENOG410XPV4) |
Kegg | Link to kegg annotations (AT3G10650) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461147.1) |
Pfam | Nucleoporin FG repeat region (PF13634.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer