Transcript | Ll_transcript_290948 |
---|---|
CDS coordinates | 373-2298 (+) |
Peptide sequence | MVLIGYHPTGAYKLYNPIKDCVQISRDVIVLEDESWIWAENKTSLNKPVPEIDDAATNTVDAAATTTDNEPTIETSISETQNAQRSQRMRSRPARFNDYELHLDNEISDEGELVHFALMALLAEAEPINEKDALQNSVWKRAMDEEIKSIEKNNTWNLVELPLDKHKIGVKWVFKQKFNPDGSISKYKARLVAKGFLQKEGLDYTEVFAPVARIETIRLVISMACAKERQMFQLDVKSAFLHGPLQEEVYVQQPPGYIIEGKEHLVYKLSKALYGLKQAPRAWNKRIDSFLFKQQFEKCEVEHGVYVKESRDGNLVIICLYVDDLLITGSNPRGIAEVKRVLEAEFEMTDLGKLSYFLGMEFSYTPTGLLMHQSKYAKELLIKYNMNSCNPVSSPVETNLRLTNDEGGEAVDATQCKQIVGSLRFLCNTRPDLIYGVGLVSRFMSNPKKSHMLAAKRLLRYVKGTTDFGVLFPLKLQKPELELTGYADSDFGGDLVERKSTSGYLFLLNGAAVSWCSKKQPVIALSNCEAEYISSSYAACQAVWLEELIKEMKIKIRSPLQLKVDNISAISLSKNPVSHGRSKHIEVRFHFLRNLVTKKRLKLEYCRTELQLADAFTKALKIGRFEELRKKMGIESLRNLS* |
ORF Type | complete |
Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 37.37% of identity |
---|---|
Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 37.3% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020987654.1) |
Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer