Transcript | Ll_transcript_290565 |
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CDS coordinates | 440-1621 (+) |
Peptide sequence | MSAGTSSYWCHRCSRSVRVLMPDMVVCSDCGGGFLEEIQHPARAIHAEEGLQRFPAAPMNMGGQRPTFDQNTRPRFRRSPRISGDRAPFNPVIILRGSRGGSTEGAAAVAAAQDDRDGRGFELMYDDGAGSGLRTLPPSMSEFLLGSGFDRILEQLSPIEINGIGRVEHPPASKAAIDSLSTIEISKNHLELESHCAVCMEPFELCTSVREMPCKHIYHEECILPWLALHNSCPVCRSELLADTIPYQSTPLMGNSTNSVAMNENENVGLTIWRLPGGGFAVGRLSGGRRGTERELPVVYTEMDGGFNNGGEPRRISWPSRGNRGGRESGGLRRFFQNMFGCLRGGGVGTRQPISISTSPSITRASSSHSNANPSVRSRRTWSMDVNSGLRSW* |
ORF Type | complete |
Blastp | Probable E3 ubiquitin-protein ligase RHC2A from Arabidopsis with 46.02% of identity |
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Blastx | Probable E3 ubiquitin-protein ligase RHC2A from Arabidopsis with 45.72% of identity |
Eggnog | zinc ion binding(ENOG41121N2) |
Kegg | Link to kegg annotations (AT2G39720) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422227.1) |
Pfam | zinc-ribbon (PF14369.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer