Transcript | Ll_transcript_291131 |
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CDS coordinates | 131-2290 (+) |
Peptide sequence | MAELLPMKDIEATASRLGIDLSTIDLHSIRLPHSDNVGIDSDDEDVLNEENLEFESGFGNIIVVDNLPVVPKEKFEKLESVIRKIYSQIGVIKNDGLWMPVDHDNEKTLGYCFIEYNTNQEAELAKERTHGYKLDRAHIFSVNMFDDFDRFMKVPDQWAPPETKPYAPGENLQHWLTDAKARDQFVIRAGSDTEVLWNDARHLKPDPVYKRTFWTESFVQWSPLGTYLATVHRQGAAVWGGATTFNRLMRYAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDANRVVINIFDVRTGKLMRDFKGSADDFAIGGAGGVTGVSWPVFKWSNGGDDKYFARIGKNVLSVYETDTFSLVDKKSIKVENIIDFSWSPTDPIIALFVPEMGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSNGDYLAVHVDRFTKTKKSTYTGFELFYIKERDIPIEVLELENKNDKIISFAWEPKGHRFAVIHGDNPKPDVSFYSMRTAQHTGRVSKLTTSKGKQANALFWSPVGHFIVLAGLKGFNGQLEFYNVDDLETMATTEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPPSFLSAEKEEEISKNLKKYSKKYEAEDQDVSLLLSEQEREKRRLLKEEWEKWVNEWTRLHEEEKLYRQNLRDGEGSDEEEEYEAKDIEVEEVMNVTEEVIDFEYDQE* |
ORF Type | complete |
Blastp | Eukaryotic translation initiation factor 3 subunit B from Arabidopsis with 76.03% of identity |
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Blastx | Eukaryotic translation initiation factor 3 subunit B from Arabidopsis with 76.81% of identity |
Eggnog | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG5354) |
Kegg | Link to kegg annotations (AT5G27640) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435267.1) |
Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer