miRNA 71 details

Id Micro71
SequenceATTTCTAGTGGGTCGTATTCA 
Annotated namesath-miR841a-3p; 
Annotated pre-miRNANone

Targets of miRNA 71

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_199921; FTRINITY_DN82240_c0_g1_i1 28 48 TGGATACGACTCACTTGAAAT BLAST psRNATarget
Ll_transcript_222109; FTRINITY_DN53119_c0_g1_i6 1395 1415 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_222111; FTRINITY_DN53119_c0_g1_i8 1398 1418 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_222107; FTRINITY_DN53119_c0_g1_i5 1395 1415 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_222114; FTRINITY_DN53119_c0_g1_i9 1398 1418 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_222110; FTRINITY_DN53119_c0_g1_i7 1416 1436 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_222103; FTRINITY_DN53119_c0_g1_i2 1419 1439 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_4082; FTRINITY_DN46159_c0_g1_i1 260 280 TGAATATGAACCACTAGAAAA BLAST psRNATarget
Ll_transcript_112164; FTRINITY_DN55444_c3_g2_i9 1101 1121 GGAATACGATTCAGTGGAAAT BLAST psRNATarget
Ll_transcript_186492; FTRINITY_DN23359_c0_g1_i1 331 351 AGGCTGCGACCTGCTAGAAAT BLAST psRNATarget
Ll_transcript_151672; FTRINITY_DN50513_c0_g2_i1 635 655 GGAGTCCGATTCATTAGAAAT BLAST psRNATarget
Ll_transcript_228972; FTRINITY_DN52770_c2_g5_i1 81 101 TAGATATGACTCAGTAGAAAT BLAST psRNATarget
Ll_transcript_150555; FTRINITY_DN57681_c0_g2_i6 881 901 CTCGTATGACCTACTAGAGAT BLAST psRNATarget
Ll_transcript_57237; FTRINITY_DN57843_c0_g1_i6 1804 1824 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_57234; FTRINITY_DN57843_c0_g1_i4 1804 1824 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_57238; FTRINITY_DN57843_c0_g1_i7 1804 1824 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_57235; FTRINITY_DN57843_c0_g1_i5 1804 1824 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_57231; FTRINITY_DN57843_c0_g1_i1 2280 2300 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_57240; FTRINITY_DN57843_c0_g1_i8 2280 2300 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_57232; FTRINITY_DN57843_c0_g1_i2 2280 2300 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_57233; FTRINITY_DN57843_c0_g1_i3 2280 2300 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_43466; FTRINITY_DN54156_c4_g1_i5 995 1015 AAAATGTGACCCACTTGAAGT BLAST psRNATarget
Ll_transcript_43467; FTRINITY_DN54156_c4_g1_i6 3243 3263 AAAATGTGACCCACTTGAAGT BLAST psRNATarget
Ll_transcript_43464; FTRINITY_DN54156_c4_g1_i3 3243 3263 AAAATGTGACCCACTTGAAGT BLAST psRNATarget
Ll_transcript_17054; FTRINITY_DN54511_c0_g1_i9 278 298 CCAATTCGATCCAATAGAAAT BLAST psRNATarget
Ll_transcript_17050; FTRINITY_DN54511_c0_g1_i8 278 298 CCAATTCGATCCAATAGAAAT BLAST psRNATarget
Ll_transcript_214331; FTRINITY_DN57768_c2_g1_i1 233 253 AAGATAAGACTTACTAGAAGT BLAST psRNATarget
Ll_transcript_272339; FTRINITY_DN54223_c0_g2_i7 25 45 TGAATATGATTTACTATAAAT BLAST psRNATarget
Ll_transcript_148029; FTRINITY_DN57604_c0_g1_i13 1053 1074 TGAATATCGGTCCACTGGAAAT BLAST psRNATarget
Ll_transcript_148031; FTRINITY_DN57604_c0_g1_i15 1053 1074 TGAATATCGGTCCACTGGAAAT BLAST psRNATarget
Ll_transcript_148019; FTRINITY_DN57604_c0_g1_i3 1053 1074 TGAATATCGGTCCACTGGAAAT BLAST psRNATarget
Ll_transcript_262693; FTRINITY_DN53668_c4_g1_i6 2092 2112 GGAATATGATTTACTGGAAAG BLAST psRNATarget
Ll_transcript_262690; FTRINITY_DN53668_c4_g1_i3 2092 2112 GGAATATGATTTACTGGAAAG BLAST psRNATarget
Ll_transcript_262694; FTRINITY_DN53668_c4_g1_i7 2092 2112 GGAATATGATTTACTGGAAAG BLAST psRNATarget
Ll_transcript_239054; FTRINITY_DN54447_c0_g3_i5 456 476 GGAAAATGGCCCATTGGAGAT BLAST psRNATarget
Ll_transcript_239050; FTRINITY_DN54447_c0_g3_i4 456 476 GGAAAATGGCCCATTGGAGAT BLAST psRNATarget
Ll_transcript_239072; FTRINITY_DN54447_c0_g3_i8 456 476 GGAAAATGGCCCATTGGAGAT BLAST psRNATarget
Ll_transcript_108616; FTRINITY_DN50727_c0_g2_i1 443 463 CAAATATGGTCCATTAGGAAG BLAST psRNATarget
Ll_transcript_108617; FTRINITY_DN50727_c0_g2_i2 488 508 CCAATATGGTCCATTAGGAAG BLAST psRNATarget
Ll_transcript_269303; FTRINITY_DN55856_c4_g2_i1 452 472 GATGTATGACCCACTAAAAAT BLAST psRNATarget
Ll_transcript_24417; FTRINITY_DN53846_c0_g1_i8 1110 1130 ATAATATGACTCTTTGGAAAT BLAST psRNATarget
Ll_transcript_391318; TRINITY_DN46456_c0_g5_i1 159 179 TGGATACGACTCACTTGAAAT BLAST psRNATarget
Ll_transcript_315658; TRINITY_DN46793_c0_g2_i6 120 140 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_315660; TRINITY_DN46793_c0_g2_i7 120 140 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_315653; TRINITY_DN46793_c0_g2_i2 141 161 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_315656; TRINITY_DN46793_c0_g2_i5 120 140 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_315654; TRINITY_DN46793_c0_g2_i3 141 161 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_315651; TRINITY_DN46793_c0_g2_i1 120 140 CGAGTAAGATCCATTAGAAAT BLAST psRNATarget
Ll_transcript_411848; TRINITY_DN45053_c0_g2_i1 243 263 TGAATATGAACCACTAGAAAA BLAST psRNATarget
Ll_transcript_402786; TRINITY_DN50559_c2_g2_i1 1286 1306 GGAATACGATTCAGTGGAAAT BLAST psRNATarget
Ll_transcript_362521; TRINITY_DN48444_c2_g1_i2 715 735 GGAGTCCGATTCATTAGAAAT BLAST psRNATarget
Ll_transcript_362518; TRINITY_DN48444_c2_g1_i1 746 766 GGAGTCCGATTCATTAGAAAT BLAST psRNATarget
Ll_transcript_402266; TRINITY_DN50540_c0_g1_i7 716 736 AGGCTGCGACCTGCTAGAAAT BLAST psRNATarget
Ll_transcript_402275; TRINITY_DN50540_c0_g1_i16 816 836 AGGCTGCGACCTGCTAGAAAT BLAST psRNATarget
Ll_transcript_477195; TRINITY_DN47464_c1_g4_i1 177 197 TAGATATGACTCAGTAGAAAT BLAST psRNATarget
Ll_transcript_477202; TRINITY_DN47464_c1_g4_i5 177 197 TAGATATGACTCAGTAGAAAT BLAST psRNATarget
Ll_transcript_313561; TRINITY_DN46958_c0_g2_i8 811 831 CTCGTATGACCTACTAGAGAT BLAST psRNATarget
Ll_transcript_313557; TRINITY_DN46958_c0_g2_i6 811 831 CTCGTATGACCTACTAGAGAT BLAST psRNATarget
Ll_transcript_415948; TRINITY_DN49685_c2_g3_i6 1778 1798 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_415941; TRINITY_DN49685_c2_g3_i1 1778 1798 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_415952; TRINITY_DN49685_c2_g3_i7 1778 1798 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_415953; TRINITY_DN49685_c2_g3_i8 1778 1798 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_415945; TRINITY_DN49685_c2_g3_i4 2366 2386 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_415944; TRINITY_DN49685_c2_g3_i3 2366 2386 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_415943; TRINITY_DN49685_c2_g3_i2 2366 2386 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_415946; TRINITY_DN49685_c2_g3_i5 2366 2386 TCGATGCGATTCATTAGAAGT BLAST psRNATarget
Ll_transcript_407889; TRINITY_DN49536_c5_g1_i1 855 875 ACAATGTGACTCTCTAGAAAT BLAST psRNATarget
Ll_transcript_471958; TRINITY_DN52041_c0_g6_i1 2621 2641 AAAATGTGACCCACTTGAAGT BLAST psRNATarget
Ll_transcript_286716; TRINITY_DN48859_c2_g3_i1 139 159 TGAGTATGGCTCAATAGAAAT BLAST psRNATarget
Ll_transcript_278841; TRINITY_DN50179_c1_g1_i1 1054 1075 TGAATATCGGTCCACTGGAAAT BLAST psRNATarget
Ll_transcript_314016; TRINITY_DN46915_c0_g1_i1 331 351 GGAATATGATTTACTGGAAAG BLAST psRNATarget
Ll_transcript_432259; TRINITY_DN37803_c0_g1_i1 151 171 AATCTGCGACTCACTGGAAAT BLAST psRNATarget
Ll_transcript_446897; TRINITY_DN51874_c0_g3_i2 437 457 GGAAAATGGCCCATTGGAGAT BLAST psRNATarget
Ll_transcript_446893; TRINITY_DN51874_c0_g3_i1 437 457 GGAAAATGGCCCATTGGAGAT BLAST psRNATarget
Ll_transcript_358453; TRINITY_DN44312_c0_g1_i1 182 202 CCAATATGGTCCATTAGGAAG BLAST psRNATarget
Ll_transcript_358454; TRINITY_DN44312_c0_g1_i2 440 460 CCAATATGGTCCATTAGGAAG BLAST psRNATarget
Ll_transcript_358455; TRINITY_DN44312_c0_g1_i3 512 532 CCAATATGGTCCATTAGGAAG BLAST psRNATarget
Ll_transcript_391623; TRINITY_DN46493_c3_g8_i2 227 247 GATGTATGACCCACTAAAAAT BLAST psRNATarget

Expression of miRNA 71


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)