Transcript | Ll_transcript_484980 |
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CDS coordinates | 889-3654 (+) |
Peptide sequence | MLFAFIQSGNISLTLASFRKGVEHFRQALEISPQSVPAQYGLALALLGLAKDCINLGAYQWGASLLEEASEVARACAFFVRNVSCIWKLHADIQLTYARCFPWIEDVQELESDKEAFSASIISWRMTCLLAARRAMFSYQRALHLSPWQANIYADIAVTSDLITSLSENCKQDSSAWLLPEKMAVGALLLEGDNYEFWMALGCLSHHNALNHHALIRGLQLNVSLAVAWGYLGKLYYKMGEKQLSRQVFDRARSIDPGLALPWASMSAESCIRELELDEAFESCSRAVQIMPLAEFQIGLTKLALPSGRLSSSQVFGAIQQAVQHSPHYPESHNLHGLVCEARKEYKSAAASYRLARHAINIGSWNIADSQVKDISINLARSLSLAGNAVDALQECENLKIQGALDAEGLQVYAFSLWQLGENGLALSVARSLAATLSSMEKASVATSICFICRLIYYMCGLDAVITNIVKMPRELFQSSKVCFVMLAINALDGNNRLGFVVTTSRYFLKYHEEIARMHFLIALGKLVKNGSVCCLDVQSGVAYLKKAMHMFPNCNLMRNLLGYLLLSSKELNDCHVAIRCCKLGHLDLSDEEGLKSAFDIHGAGAVACYATSNSSPKFTFPTCTMQCSSHSGAIRYLQKSFHQKPWNHDARYLIVLNYLQRAREERFPHHLCVILKRLTHVALANELYSKTEMLYQYRHFQLLLCASEISLQCGDHITSISHAKKASELVLPDDYLFFAHLLLCRVYAMIGDHLNFKNEFAQCLELRTDCHIGWICLKLMECRYELQISSNVIDLNFEECVQKGGNSWNMWMAVYNLVRGMISLQNRDLFSAEEFMGQACSLTGFESCLFLCHGVICMELGRQLNDSKFLLQAAMSLTKVHELSLIPLPLVSVLVAQAEGSLGSKEKWNRNLSFEWDTWPP |
ORF Type | 3prime_partial |
Blastp | Tetratricopeptide repeat protein SKI3 from Arabidopsis with 54.61% of identity |
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Blastx | Tetratricopeptide repeat protein SKI3 from Arabidopsis with 56.29% of identity |
Eggnog | Tetratricopeptide repeat domain 37(ENOG410ZG1H) |
Kegg | Link to kegg annotations (AT1G76630) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423132.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer