Transcript | Ll_transcript_395667 |
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CDS coordinates | 231-4901 (+) |
Peptide sequence | MGSSEIDQNVSQSLSSNNPNPIDPRSYQLEVFEVAKKRNTIAVLDTGSGKTLVAVMLIKEAYKAIKSSHIKKLIIFLAPTVNLVNQQFKHIKDLTGFKVEEYYGAKGVDTWDLKIWEKEISENDVLVMTPQILLDALRKAFLSIEMICLMIMDECHRATGKHPYSKIMEEFYHKANEKPKIFGMTASPVGKKVGVSSTKGCEGQISELEYILDSRRYTVEDRKEIDIHIPSAKESCRYYDQAQYPVLRLKLKIEALFESNALFSELRSLAQSEDVDYKFKKLHNGMFNKLEKILYCLEDLGSICAYEAAQMYHESFSKIIGGCEVYRNASLKCKFFMEKVMQLIEESLHLDDKKNSEVEFDYSKAVELRHISPKLLELIKIFQSLGESSQMSCLIFVERKLTAKLMEKFVKKVSHISHFTVSYITGGNTAVDALSPKKQKEILDSFRSGGVNLLITTDVAEEGIDVPNCSCVIRFDLPKTVRSYVQSRGRCRQPNSQFIVMLERGNLKQRNQLFDIIRSERSMTNAATNKDQNASNLRVFTVGKTNAYHVNSTGASVTLDSSVGLINRYCEKLPHDKYSRVKPTFEFQPMGGGYACKLTLPPNAAFQIIVGPSGKDVHLARHLVCLEACKKLHQMGALNDHLVPLIKEEPLETDCIVKNKESSSGPGSGTTKRKELHGTTSIRALCGTWGDKLDDTKFHAYKFDFTCNIVSEIYSGFVLLVESKLDDDVGNMEVDLYLISKMVKASVYSRGQVDLDAEQMMNAKCFQEFFFNGLFGRLVLRSKSAARGGREFLLQKDTNTLWNPTYMFLLLPLEKLNDSCMGSLTINWSGIKSCASAIGFLRKKFLLVAGDCCNDSDDTKITSPCDTSPMEVESQDKNNIYFANCMLDVNNLKDVVVLAIHTGRIYCIVELDINLSAESPFDGNDEKSGGEQITFADYYKKRYGITLRHPGQHLLRLKQSHNAHNLLLNFHEEDGRDKASQTGQAQSKMPAHVYIPPELLYVLDVKRDVLRSMYLLPSLMHHLQSFMLSSQLREEIGGQTNNFNIPSALILEALTTLRCAEKCSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSGMRSLAVCNSTLHKRATDHKLQEYIRDSAFEPRRWVAPGQISIHPVCCECGLETQEVPLDGKFHTEDPKVVVGKLCDKGHRWMCSKTIADCAEALIGAYYVGGGLIAALHVMKWLGIDAELEPSLVDEAITAASLHAYVPKVEEIGSLEMKIGYEFSIKGLLLEAMTHVSGKEVGISCCYERLEFLGDSVLDLLITRHLYQSHTDIDPGELTDLRSASVSNENFAQVAVRRNLHLHLLHGSELLLSQIADYVKVISESENNTRSFQGIRAPKPLGDLVESIAGAMLIDTKLNVDQVWKVFNPLLSPIVTPDKLELPPWRELNELCDSLRCFVKESCVKKGPMVHATLSVQLHDTLLVREGKGQNAKTAKGDAALHLLKDLEKRGISYSSSVSKRKRDASGLTDENSLKPVAQLEYKRQKVDETNLTANAHTGLLPLKDTSMEASNLGASVPGFAQSLLF* |
ORF Type | complete |
Blastp | Endoribonuclease Dicer homolog 3a from Oryza sativa with 50.66% of identity |
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Blastx | Endoribonuclease Dicer homolog 3a from Oryza sativa with 50.66% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (4324864) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435974.1) |
Pfam | DEAD/DEAH box helicase (PF00270.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer