Protein coding transcript 72579

• Transcript: Ll_transcript_353318
• CDS coordinates: 198-3389 (+)
• Peptide sequence: MIKLQRSFTTCSTSTFSTSSSLSLRHFFMLQFRMLQSSPNSCLQYTALGVGIGNSIQCQRCFPNVKIGVKPKNYSSIQPSFRSFSGTRVSGRGSRCIAASLGDFGFRYLGNGVGRSLISDGGFPKRFSSIVKKGTDNKKKGVKALAVHGKDKDASDGASDSKDVVVNGVTSRKSSDENKKKPKKVSPVSTAPSDAASDKKDTKVAAKKKKPSKSKKNSTVAGAEVSTKSSKGKKTSNSSEPKADSAVEEVPDNNAPTKNQTKKKSGNTAQAEQVKSSLGKFTDKPLYPPTGKSVLVVESVTKAKVIQGYLGDMYEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSPAWTHLKSIKVALSGAENLILASDPDREGEAIAWHIVEMLQQQGALHDNISVARVVFHEITEKAIKGALQAPREIDVSLVHAYLARRALDYLIGFNISPLLWRKLPGCQSAGRVQSAALSLICDREMEIDEFKPKEYWTAEAHLKRKEPGSNEDLNFPAHLTHLDSKTLNQFSITSNTEATDVENKINSAELQVIRLKRNKIRRNPPTPYITSTLQQDAANKLHFAASHTMKLAQKLYEGVELSDGKAVGLITYTRTDGLHISDEAVTNIRSLITERYGQEFAAQSAPKYIKKVKNAQEAHEAIRPTDIQKLPSMLVGVLDEESLKLYTLIWSRTVSCQMEPAIFEQIQVDIGNAGESIILRSTSSRVDFAGYRAVFTDTETEAVQDKGNDGSNRDQYFGVLSSLKQGDPLLLVRAELNQHHTQPPPRYSEASLVKKLEELGIGRPSTYASTLKVLKDRNYVIVKSRVLTPEFRGRMVSAFLSHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFKSYCDRTSNVHIHQVEKMLEKKFGDYLFASLPDQSRVCPSCMEGTLIFKVSRFGSGYFIGCDQHPRCKYIAKTLYGVDEDEDTPQPNTTIEEPKILGVSSGSNEKVLLKKGPYGFYIQLGEDRKGYIPKRSSVSHIKDVDSITLEDALDLLKYPLTLGNHPDDGQPVILKLARVGFSVRYRRTIASVPKANAY*
• ORF Type: complete

Annotations of Ll_transcript_353318

• Blastp: DNA topoisomerase 1 from spotted fever group with 43.21% of identity
• Blastx: DNA topoisomerase 1 from spotted fever group with 43.21% of identity
• Eggnog: Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone (By similarity)(COG0550)
• Kegg: Link to kegg annotations (RF_0530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438806.1)
• Pfam: Toprim domain (PF01751.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;