Protein coding transcript 77718

TranscriptLl_transcript_454370
CDS coordinates2275-4743 (+)
Peptide sequenceMNDFFSNKGIIHQRSCVNTPQQNGVVERKHQHILCVARAIFFQCSLPSTLWNFAIQHAVHIINRLPSPLLKNSSPYQLVYGCLPTLDSLRVFGCLVYASTLSAGRGKFDSRARKCIFLGYKEGSKGFIIYDLSSHEIFISRDVVFYEKFFPMMSTSSSPNLPHAHGSNPLESNTIPSFESNTQSVPESIPPISNTSSFFESNTDSVPESTSHTSNNSSFFESDTSPSHESNSDSYTPSPTSNTSSPTVTLRQSTRHRQPPSHLKDYHCVLAHTVTKPVSCSKVAYPLSSVLDYSKCSPGYKKFCLSISSESDPTTYREAVKSSHWRQAMDAELQALVLNQTWSLVPLPADKATIGCKWVYKTKVHADGTIERHKARLVAKGYTQLEGVDFFDTFSPVVKITTVRTVLALAAIKGWFLEQLDVNNAFLHGDLHEEVYMDPPPGLALADSTHVCKLHKSLYGLKQASREWHHTLPCALISLGYSHSEADQALFTKVASQSFTAILVYVDDMVLAGTDSHEITQVKEYLDHTFKIKDLGSLRFFLGLEIARTTDDIHLNQRKYTLSLLEESGTLAAKLAKLPFDPSLKLQQEQGTPLADVLSYRRLVGKLLYLTISRPDIAYAVQQLSLFMCNPMDIHYKAGLRVLHYLKTSPAQGLFFPTNSELKLSGFADSDWACCLDTRRSITVFCIFLGSSLIAWKSKKQSTVSRSSTEAEYRALGSIACELQWLKFLLTDLHISLLTPASVYCDNRSAIYLAHNPVFHERSKHIEVDCHVIREKIRSCLIHLLPISSKDQLADAFTKPLPHASFSGFLSKLGLVSLHHPT*
ORF Typecomplete

Annotations of Ll_transcript_454370

BlastpRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 34.02% of identity
BlastxRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 39.22% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_017415202.1)
PfamReverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer