miRNA 80 details

Id Micro80
SequenceCCCCAAATGTAGACAAAGCA 
Annotated namesath-miR158b; 
Annotated pre-miRNANone

Targets of miRNA 80

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_271774; FTRINITY_DN51006_c0_g1_i6 919 938 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_271772; FTRINITY_DN51006_c0_g1_i4 919 938 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_150692; FTRINITY_DN57639_c1_g3_i7 663 682 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150689; FTRINITY_DN57639_c1_g3_i5 762 781 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150684; FTRINITY_DN57639_c1_g3_i3 663 682 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150702; FTRINITY_DN57639_c1_g3_i11 762 781 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150690; FTRINITY_DN57639_c1_g3_i6 663 682 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150705; FTRINITY_DN57639_c1_g3_i12 762 781 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150700; FTRINITY_DN57639_c1_g3_i10 663 682 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150688; FTRINITY_DN57639_c1_g3_i4 762 781 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_67184; FTRINITY_DN55070_c2_g11_i1 270 289 TGCTTTCTTTGTGTTTGGGG BLAST psRNATarget
Ll_transcript_199476; FTRINITY_DN49924_c1_g1_i1 882 901 TGTTTTTTCTACAATTGGGG BLAST psRNATarget
Ll_transcript_179085; FTRINITY_DN58617_c1_g2_i1 2223 2242 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_179107; FTRINITY_DN58617_c1_g2_i5 1163 1182 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_179111; FTRINITY_DN58617_c1_g2_i6 2223 2242 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_187822; FTRINITY_DN56709_c3_g1_i5 625 644 CGTTTTGCTTATATTTGGGG BLAST psRNATarget
Ll_transcript_76819; FTRINITY_DN55525_c0_g1_i7 105 124 TCCTTTTTCTATGTTTGGGG BLAST psRNATarget
Ll_transcript_202275; FTRINITY_DN56441_c6_g1_i8 2745 2764 TGGTTGGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_202270; FTRINITY_DN56441_c6_g1_i3 2748 2767 TGGTTGGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_202268; FTRINITY_DN56441_c6_g1_i2 2751 2770 TGGTTGGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_202272; FTRINITY_DN56441_c6_g1_i5 2754 2773 TGGTTGGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_202267; FTRINITY_DN56441_c6_g1_i1 2829 2848 TGGTTGGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_133585; FTRINITY_DN76828_c0_g1_i1 214 233 CTCTTTTTTTATATTTGGGG BLAST psRNATarget
Ll_transcript_5927; FTRINITY_DN58567_c1_g1_i10 2154 2173 TGCTTTGTTTTCATTTTGGG BLAST psRNATarget
Ll_transcript_5932; FTRINITY_DN58567_c1_g1_i14 2244 2263 TGCTTTGTTTTCATTTTGGG BLAST psRNATarget
Ll_transcript_5922; FTRINITY_DN58567_c1_g1_i5 2359 2378 TGCTTTGTTTTCATTTTGGG BLAST psRNATarget
Ll_transcript_5931; FTRINITY_DN58567_c1_g1_i13 2359 2378 TGCTTTGTTTTCATTTTGGG BLAST psRNATarget
Ll_transcript_182168; FTRINITY_DN53594_c1_g3_i2 167 186 CAAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_182180; FTRINITY_DN53594_c1_g3_i5 167 186 CAAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_182184; FTRINITY_DN53594_c1_g3_i6 167 186 CAAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_262118; FTRINITY_DN51256_c0_g1_i5 1670 1689 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_262114; FTRINITY_DN51256_c0_g1_i1 1760 1779 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_262116; FTRINITY_DN51256_c0_g1_i3 1769 1788 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_262117; FTRINITY_DN51256_c0_g1_i4 1870 1889 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_262122; FTRINITY_DN51256_c0_g1_i9 1670 1689 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_182174; FTRINITY_DN53594_c1_g3_i3 167 186 CAAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_262121; FTRINITY_DN51256_c0_g1_i8 1760 1779 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_262120; FTRINITY_DN51256_c0_g1_i7 1769 1788 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_182175; FTRINITY_DN53594_c1_g3_i4 167 186 CAAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_262119; FTRINITY_DN51256_c0_g1_i6 1870 1889 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_89580; FTRINITY_DN53923_c1_g1_i2 1033 1052 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_89579; FTRINITY_DN53923_c1_g1_i1 1033 1052 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_56611; FTRINITY_DN57817_c0_g1_i6 1733 1752 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_214637; FTRINITY_DN57756_c2_g2_i4 2321 2340 GGTTTTGTTTGTATTTGTGG BLAST psRNATarget
Ll_transcript_56607; FTRINITY_DN57817_c0_g1_i2 1733 1752 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_56612; FTRINITY_DN57817_c0_g1_i7 1733 1752 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_214646; FTRINITY_DN57756_c2_g2_i10 2742 2761 GGTTTTGTTTGTATTTGTGG BLAST psRNATarget
Ll_transcript_56613; FTRINITY_DN57817_c0_g1_i8 1733 1752 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_56610; FTRINITY_DN57817_c0_g1_i5 1733 1752 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_56614; FTRINITY_DN57817_c0_g1_i9 1733 1752 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_265547; FTRINITY_DN84926_c0_g1_i1 205 224 AACTGTGTTTACATTTGGGC BLAST psRNATarget
Ll_transcript_77940; FTRINITY_DN67871_c0_g1_i1 840 859 ATCTTTTTCTACGTTTGGGA BLAST psRNATarget
Ll_transcript_425256; TRINITY_DN43967_c0_g1_i1 877 896 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425257; TRINITY_DN43967_c0_g1_i2 877 896 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425258; TRINITY_DN43967_c0_g1_i3 877 896 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425262; TRINITY_DN43967_c0_g1_i7 877 896 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425259; TRINITY_DN43967_c0_g1_i4 877 896 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_303959; TRINITY_DN48254_c3_g3_i1 416 435 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_303966; TRINITY_DN48254_c3_g3_i5 515 534 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_303969; TRINITY_DN48254_c3_g3_i7 416 435 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_303963; TRINITY_DN48254_c3_g3_i3 515 534 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_529155; TRINITY_DN51019_c2_g1_i1 303 322 TGCTTTCTTTGTGTTTGGGG BLAST psRNATarget
Ll_transcript_293233; TRINITY_DN49124_c0_g4_i1 469 488 TGTTGTGTCTACAATTGGGG BLAST psRNATarget
Ll_transcript_338939; TRINITY_DN48573_c4_g7_i2 136 155 TGTTTTTTCTACAATTGGGG BLAST psRNATarget
Ll_transcript_460763; TRINITY_DN51141_c0_g3_i5 1163 1182 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_460759; TRINITY_DN51141_c0_g3_i4 1993 2012 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_460772; TRINITY_DN51141_c0_g3_i9 1993 2012 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_460755; TRINITY_DN51141_c0_g3_i2 2273 2292 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_460768; TRINITY_DN51141_c0_g3_i6 1993 2012 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_460774; TRINITY_DN51141_c0_g3_i11 2273 2292 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_301369; TRINITY_DN61190_c0_g1_i1 338 357 GGTTTTGTCTACATTTTGGA BLAST psRNATarget
Ll_transcript_442575; TRINITY_DN47865_c1_g1_i1 621 640 CGTTTTGCTTATATTTGGGG BLAST psRNATarget
Ll_transcript_368753; TRINITY_DN48692_c1_g3_i4 1954 1973 TGGTTGGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_368757; TRINITY_DN48692_c1_g3_i6 1899 1918 TGGTTGGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_368754; TRINITY_DN48692_c1_g3_i5 1954 1973 TGGTTGGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_422528; TRINITY_DN47905_c3_g2_i1 142 161 CTCTTTTTTTATATTTGGGG BLAST psRNATarget
Ll_transcript_422531; TRINITY_DN47905_c3_g2_i2 142 161 CTCTTTTTTTATATTTGGGG BLAST psRNATarget
Ll_transcript_486879; TRINITY_DN52374_c0_g1_i1 2116 2135 TGCTTTGTTTTCATTTTGGG BLAST psRNATarget
Ll_transcript_486881; TRINITY_DN52374_c0_g1_i3 2321 2340 TGCTTTGTTTTCATTTTGGG BLAST psRNATarget
Ll_transcript_486892; TRINITY_DN52374_c0_g1_i11 2439 2458 TGCTTTGTTTTCATTTTGGG BLAST psRNATarget
Ll_transcript_379809; TRINITY_DN50753_c1_g2_i2 1126 1145 CAAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_379815; TRINITY_DN50753_c1_g2_i7 1045 1064 CAAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_379810; TRINITY_DN50753_c1_g2_i3 1803 1822 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_379808; TRINITY_DN50753_c1_g2_i1 1123 1142 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_379812; TRINITY_DN50753_c1_g2_i5 1126 1145 CAAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_379811; TRINITY_DN50753_c1_g2_i4 1803 1822 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_379813; TRINITY_DN50753_c1_g2_i6 1803 1822 GCAGTTGTTTACATTTGGGG BLAST psRNATarget
Ll_transcript_499499; TRINITY_DN14525_c0_g1_i1 139 158 TGCTTTTTCTGTATTTGGAG BLAST psRNATarget
Ll_transcript_396224; TRINITY_DN41972_c0_g1_i2 1050 1069 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_386230; TRINITY_DN50905_c0_g1_i7 2032 2051 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_386229; TRINITY_DN50905_c0_g1_i6 2132 2151 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_396225; TRINITY_DN41972_c0_g1_i3 1050 1069 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_528156; TRINITY_DN51056_c0_g1_i16 2269 2288 GGTTTTGTTTGTATTTGTGG BLAST psRNATarget
Ll_transcript_528140; TRINITY_DN51056_c0_g1_i9 2356 2375 GGTTTTGTTTGTATTTGTGG BLAST psRNATarget
Ll_transcript_528159; TRINITY_DN51056_c0_g1_i18 2465 2484 GGTTTTGTTTGTATTTGTGG BLAST psRNATarget
Ll_transcript_396226; TRINITY_DN41972_c0_g1_i4 1050 1069 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_396223; TRINITY_DN41972_c0_g1_i1 1050 1069 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_386233; TRINITY_DN50905_c0_g1_i10 2030 2049 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_386231; TRINITY_DN50905_c0_g1_i8 2030 2049 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_386225; TRINITY_DN50905_c0_g1_i2 2030 2049 GGTTTTGTTTGTAATTGGGG BLAST psRNATarget
Ll_transcript_338932; TRINITY_DN48573_c4_g7_i1 61 80 TGGTGTGTCTACAGTTGGGG BLAST psRNATarget
Ll_transcript_477876; TRINITY_DN53184_c0_g1_i1 30 49 TACTTAGTTTGTATTTGGGG BLAST psRNATarget
Ll_transcript_459065; TRINITY_DN38524_c0_g1_i2 532 551 ATCTTTTTCTACGTTTGGGA BLAST psRNATarget
Ll_transcript_435705; TRINITY_DN48986_c2_g7_i1 323 342 AACTGTGTTTACATTTGGGC BLAST psRNATarget
Ll_transcript_459064; TRINITY_DN38524_c0_g1_i1 1644 1663 ATCTTTTTCTACGTTTGGGA BLAST psRNATarget

Expression of miRNA 80


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)