Transcript | Ll_transcript_457703 |
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CDS coordinates | 258-2819 (+) |
Peptide sequence | MNVDHNQPHTNSHTLQTLTSAPISSSISNLSSSDRDFKFYRNFNEFKLPVNEISKESQFMLQSIGASIAKDSTFPVDIDEAYDWAVNVNDDVLERFDISADEFRKVRMDEEEGVVREEANSAMEDDGFTLVCRNKKKNGGKNCDSLERMVIDSETSVKVAMKDKKTIGPKSKVPFHIPTIRRPQDEYTIMVNNSNMPFEHVWLERSGDGQRVIHPLEKLSVLDFVDKDPGNVVPVKPPPLESTPFRLVEDVKSLKELAAKLRSANEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRVHVGPYLREVFKDPAKRKVMHGADRDIVWLQRDFGIYICNLFDTGQASKVLKLERNSLEYLLRHFCEIAANKEYQNADWRVRPLPDEMLRYAREDTHYLMYMYDLMRINLFALSKESGSSDDPLLEVYERSYDVCMQLYEKELLTENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDVVARSMDESTGYILPNKAVLEIAKQMPVTTIKLLRLVKSKHPFVERNLDSVLDIIKHSIQNAAAFEEAAQQLSEGNASTSSDVVPVKDRTEDPQLHTQDSKESSQHQDINVLVKIKSPSFTFSKAKENRASIDVLKKPTGAFGALLGSSASKRKLNLENKDNEEIKLEQIRSSVNLPFHSFLGGSQVSKPVVKSPSLASGTSNPQKPVPVHVSTSTLDEIIILESDTTVEDMEQNNIENCNDHGEINSNVSTSGKEDEVEAMSLSELSSSFQKCFQSNNQHNKTRLLKKTEQVGGLLQLKPFDYEEAMKHVKFGENKKHASFQNDGNAGQDDSGSKKKHSTTVQEQTTDLTKQLQQGRRRQAFPVSGNRSSTFR* |
ORF Type | complete |
Blastp | Protein RRP6-like 2 from Arabidopsis with 52.93% of identity |
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Blastx | Protein RRP6-like 2 from Arabidopsis with 52.47% of identity |
Eggnog | Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides (By similarity)(COG0349) |
Kegg | Link to kegg annotations (AT5G35910) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442868.1) |
Pfam | PMC2NT (NUC016) domain (PF08066.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer