Transcript | Ll_transcript_456238 |
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CDS coordinates | 199-6057 (+) |
Peptide sequence | MWTNVFKIPGLHQISWFQFMPHEPDLNPPLPLPDNKSAKVDAAMLQVLSSHLQLQKEGFLTAWTNSFVGPWDPSQGLHNPDEKIKLWLFIPGRHSSLLDNAQPLVSTLRVVASGLWLAPGDSEEVASALSQALRNCIERSLIGLYYMRFGDVFSKFHQLQSEELFRRGHPALEFAFAANEEAIFIHVILSSKHIRMLTTGDLEKVLKHSTEATHGLPVIVSPHGIRGSLTGCSPSDLVKQSYFSSAKVKASNGIVGLPYHVPQGVGCKLRGQNCHVEVRLGFPRPGTDKASQQNKNNVRNLTKFNAAESLVVGQSDHKGSPNHLSDYEKTFLYPAEAVLVPVLQTSLARSSLRRFWLQNWMGPSLPGSLSFIHCAGNLDNSEDPWTEINGTRTQNSYDSSSNSNSSSISSLSASSSDSDYKTTGPSELEADADSLTCRQSVLSSGDQLQSDGLKLGSKRSRTGVTESLSTATNVIVQDAYMSDVGSMEVNNSAITVGNEPIGSYWNWDDDDRDPVMDIGALLSEFGDFGDFFVNDVLPFGEPPGTAESQALVFSAPDCGDVNSSPVGVMDVSDQTLLPVGFTSFESFNPPPSIAMEECLSKNQDNLNNSMSSVPVNQTQISCTREVEHIMKAEAMMIFTAEFGAVETPTSDLSTLFTSPYFPKSRKAESSNSSSNNYLYGAAPPSTPYIDGSEGKNGMVATTKTICGKHDASTSLHPRNYYNYVESRKDINDRKPANLNDNVNGKSEGMVQPLFSNIGSNAVTKSVLRKMSEGTHETEHFLLSAKTLLATDVTCVMLQASMCRLRHILLSSSNLMPVGLSRSTGATFFNQLPGDPSTTTDNISNKYEVKKKENIPVRIAGDIDGGMLDGHQNAPVGVWRTVGVSKVVKSSNSPNMEVGPSFSHTSFNEDGMLSYSQRKPLQELLDGIPLLVQQAISFVDLALDADWGDGPYGLLALQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGVELLDPLSADVHASTVISLLQSDVKTALKSAFSNLEGPLSVTDWCKGRNQLVDAGSIVDGVSAESSISECRDSSEPMSPSQSSVAGSSIIKGSSMMDSAKVDEISQRRIGQDICSSESERQPCSRLKPTLTALPFPSILMGYQDDWLKTSANCLQYWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQVLGNQMEIESGKLSSSGFVLLDCPQSMKIESSHASLVGSISDYFLSLSNGWDLTSYLKSLSKALRALKLSSCLSTNPTEGSNSSCMVIYVVCPFPDPTAILQTVIESSVAIGSVIQQSDREKRSTLHSQVLKALSGLATVDEASASNILVLSGFSIPKLVLQIVTVDAIFRVTGPSVSELAILKETAFTVYSKARRISRGISSDFPLSAFSGRSHSVLTQMPSPISGMWKDSVGPRIVGHSLPREGDIDASLRSGGWDNSWQPTRSAGLNCDPSRSGDTFFHDEIRYMFEPLFILAEPGSLDHGTSVIGSPTSESSKTLGDDSSGSYMQQSTSTAGSMDSASSIDGLGSDQKTPPSLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFAQVLQQGCLILQSCDTSLAKPRDFVIARIGGFYELEYLEWQKAIYSFGGSEMKRWPLQLRKYMSDGVSITSNGSSLQQPEMSLIPERTLPSSPSPLYSPHTKATGFMKGGSLGQSAVRKQHMGGHSMVDNNSRGLLHWAQSISFVAVSMDHTLQLVLPASDSSGYTEGFTPVKSLGSTSCAYVVIPSPSMRFLPPTALQLPTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDHRSNLKEEWPSVLSVSLIDYYGVANIRGINNKQQGGGRSLSWETKDFETETHLVLETLAAELHALSWMTVSPTYIERRTSLPFHCDMVLRLRRLLHFADKELSKKSEKS* |
ORF Type | complete |
Blastp | Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.34% of identity |
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Blastx | Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.25% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AT1G55325) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438262.1) |
Pfam | Mediator complex subunit 13 C-terminal (PF06333.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer