Transcript | Ll_transcript_277984 |
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CDS coordinates | 915-1901 (+) |
Peptide sequence | MRKYLYVLPAEIIGIQSHSSNDEIDYHISEFNNILKEFEGGHPFHNYTARSKYRKHSLRRHSSSKSGTSISTSMSASESDCEDNDGGENFIFDEAFTENIMCHSKKNSETDDYGEPVVETSNKNGNGLSGQDSKLVVRAKWLHEPDEADRLNASHFRKVFQCSCGKLERSLGYNYVELSIHGESFMLHQIRKMVGTAVAVKRKLLPKDILMLSLLKFSRIILPIAPPEVLILRANSFILRTRPGKVTRLEMLTIVESDEINKVADDFYTSVMLPQVSKFLNPSKSPWEEWIKKLDAHTSIPNDQLDEVRKAWKLWKGNLESSTSIHPS* |
ORF Type | complete |
Blastp | Putative tRNA pseudouridine synthase from Arabidopsis with 48.43% of identity |
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Blastx | Putative tRNA pseudouridine synthase from Arabidopsis with 57.53% of identity |
Eggnog | Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (By similarity)(COG0101) |
Kegg | Link to kegg annotations (AT2G30320) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456938.1) |
Pfam | tRNA pseudouridine synthase (PF01416.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer