miRNA 82 details

Id Micro82
SequenceCCCGCCTTGCATCAACTGAAT 
Annotated namesbra-miR168c-3p; ptc-miR168a-3p; aly-miR168a-3p; ath-miR168a-3p; sly-miR168b-3p; ptc-miR168b-3p; mtr-miR168c-3p; bra-miR168b-3p; 
Annotated pre-miRNAvun-MIR168

Targets of miRNA 82

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_224758; FTRINITY_DN56194_c3_g9_i1 44 64 ATTCAGTTGATGCAAGGCGGG BLAST psRNATarget
Ll_transcript_202055; FTRINITY_DN56443_c1_g1_i5 128 148 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_202051; FTRINITY_DN56443_c1_g1_i2 128 148 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_202057; FTRINITY_DN56443_c1_g1_i7 307 327 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_202053; FTRINITY_DN56443_c1_g1_i4 128 148 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_202056; FTRINITY_DN56443_c1_g1_i6 307 327 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_202052; FTRINITY_DN56443_c1_g1_i3 128 148 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_194593; FTRINITY_DN50619_c0_g1_i3 653 673 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194605; FTRINITY_DN50619_c0_g1_i15 726 746 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194596; FTRINITY_DN50619_c0_g1_i6 742 762 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194603; FTRINITY_DN50619_c0_g1_i13 805 825 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194591; FTRINITY_DN50619_c0_g1_i1 984 1004 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194599; FTRINITY_DN50619_c0_g1_i9 1479 1499 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194608; FTRINITY_DN50619_c0_g1_i18 2419 2439 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194598; FTRINITY_DN50619_c0_g1_i8 2435 2455 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194607; FTRINITY_DN50619_c0_g1_i17 2498 2518 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194604; FTRINITY_DN50619_c0_g1_i14 2677 2697 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194595; FTRINITY_DN50619_c0_g1_i5 2878 2898 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194601; FTRINITY_DN50619_c0_g1_i11 2894 2914 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194594; FTRINITY_DN50619_c0_g1_i4 2957 2977 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194606; FTRINITY_DN50619_c0_g1_i16 3136 3156 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194592; FTRINITY_DN50619_c0_g1_i2 3172 3192 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194602; FTRINITY_DN50619_c0_g1_i12 3631 3651 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_32827; FTRINITY_DN58428_c1_g1_i11 2706 2726 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_32835; FTRINITY_DN58428_c1_g1_i15 7175 7195 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_32838; FTRINITY_DN58428_c1_g1_i17 7254 7274 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_32841; FTRINITY_DN58428_c1_g1_i19 7327 7347 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_32823; FTRINITY_DN58428_c1_g1_i7 7406 7426 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_39772; FTRINITY_DN58910_c2_g4_i3 618 638 AGGCAGTAGATGCAAGGCGGT BLAST psRNATarget
Ll_transcript_39769; FTRINITY_DN58910_c2_g4_i2 618 638 AGGCAGTAGATGCAAGGCGGT BLAST psRNATarget
Ll_transcript_39758; FTRINITY_DN58910_c2_g4_i1 618 638 AGGCAGTAGATGCAAGGCGGT BLAST psRNATarget
Ll_transcript_219430; FTRINITY_DN56309_c0_g6_i1 1512 1532 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_219431; FTRINITY_DN56309_c0_g6_i2 1512 1532 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_219432; FTRINITY_DN56309_c0_g6_i3 1512 1532 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_171723; FTRINITY_DN57005_c2_g1_i8 569 589 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_171717; FTRINITY_DN57005_c2_g1_i4 569 589 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_171718; FTRINITY_DN57005_c2_g1_i5 795 815 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_171725; FTRINITY_DN57005_c2_g1_i9 795 815 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_250532; FTRINITY_DN55930_c2_g5_i3 836 856 AAATAGTTGGTGTGAGGTGGG BLAST psRNATarget
Ll_transcript_309939; TRINITY_DN47121_c0_g4_i3 277 297 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_309937; TRINITY_DN47121_c0_g4_i2 277 297 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_309934; TRINITY_DN47121_c0_g1_i3 152 172 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_309933; TRINITY_DN47121_c0_g1_i2 152 172 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_309931; TRINITY_DN47121_c0_g1_i1 152 172 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_309940; TRINITY_DN47121_c0_g1_i4 152 172 GTTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_283456; TRINITY_DN44649_c0_g1_i8 275 295 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283451; TRINITY_DN44649_c0_g1_i3 734 754 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283449; TRINITY_DN44649_c0_g1_i1 867 887 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283459; TRINITY_DN44649_c0_g1_i11 1125 1145 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283455; TRINITY_DN44649_c0_g1_i7 1620 1640 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283460; TRINITY_DN44649_c0_g1_i12 1646 1666 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283457; TRINITY_DN44649_c0_g1_i9 2105 2125 AAAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_297430; TRINITY_DN51754_c0_g1_i11 229 249 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_297437; TRINITY_DN51754_c0_g1_i17 953 973 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_297422; TRINITY_DN51754_c0_g1_i4 7257 7277 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_297424; TRINITY_DN51754_c0_g1_i6 7257 7277 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_297423; TRINITY_DN51754_c0_g1_i5 7409 7429 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_297443; TRINITY_DN51754_c0_g1_i22 7257 7277 CCACAGCTGGTGCAAGGCGGG BLAST psRNATarget
Ll_transcript_473745; TRINITY_DN52053_c0_g6_i1 655 675 AGGCAGTAGATGCAAGGCGGT BLAST psRNATarget
Ll_transcript_365715; TRINITY_DN46311_c0_g1_i1 32 52 TCTGAGTTGGTGTAGGGTGGG BLAST psRNATarget
Ll_transcript_282238; TRINITY_DN46156_c3_g1_i5 370 390 TCTGAGTTGATGCAGGGGGGG BLAST psRNATarget
Ll_transcript_282233; TRINITY_DN46156_c3_g1_i1 397 417 TCTGAGTTGATGCAGGGGGGG BLAST psRNATarget
Ll_transcript_365716; TRINITY_DN46311_c0_g1_i2 32 52 TCTGAGTTGGTGTAGGGTGGG BLAST psRNATarget
Ll_transcript_365722; TRINITY_DN46311_c0_g1_i5 32 52 TCTGAGTTGGTGTAGGGTGGG BLAST psRNATarget
Ll_transcript_365721; TRINITY_DN46311_c0_g1_i4 32 52 TCTGAGTTGGTGTAGGGTGGG BLAST psRNATarget
Ll_transcript_365718; TRINITY_DN46311_c0_g1_i3 32 52 TCTGAGTTGGTGTAGGGTGGG BLAST psRNATarget
Ll_transcript_524435; TRINITY_DN31235_c0_g1_i1 196 216 CTTCAGTTGATGCAACTTGGG BLAST psRNATarget
Ll_transcript_486924; TRINITY_DN52310_c1_g3_i4 501 521 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_388384; TRINITY_DN50967_c0_g2_i3 1404 1424 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_388405; TRINITY_DN50967_c0_g2_i15 1364 1384 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_388413; TRINITY_DN50967_c0_g2_i18 1404 1424 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_388418; TRINITY_DN50967_c0_g2_i20 1404 1424 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_388404; TRINITY_DN50967_c0_g2_i14 1364 1384 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_388402; TRINITY_DN50967_c0_g2_i12 1404 1424 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_388407; TRINITY_DN50967_c0_g2_i16 1404 1424 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_388394; TRINITY_DN50967_c0_g2_i7 1404 1424 CTTCGGTTGTTGCAACGCGGG BLAST psRNATarget
Ll_transcript_486923; TRINITY_DN52310_c1_g3_i3 803 823 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_486929; TRINITY_DN52310_c1_g3_i6 791 811 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_486921; TRINITY_DN52310_c1_g3_i1 1211 1231 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_486925; TRINITY_DN52310_c1_g3_i5 791 811 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_486930; TRINITY_DN52310_c1_g3_i7 791 811 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_486922; TRINITY_DN52310_c1_g3_i2 1199 1219 GTGTAGTTGGTGCAAGGCTGG BLAST psRNATarget
Ll_transcript_377998; TRINITY_DN50758_c3_g3_i5 862 882 AAATAGTTGGTGTGAGGTGGG BLAST psRNATarget
Ll_transcript_377982; TRINITY_DN50758_c3_g3_i1 901 921 AAATAGTTGGTGTGAGGTGGG BLAST psRNATarget
Ll_transcript_378000; TRINITY_DN50758_c3_g3_i6 1040 1060 AAATAGTTGGTGTGAGGTGGG BLAST psRNATarget
Ll_transcript_378001; TRINITY_DN50758_c3_g3_i7 2874 2894 AAATAGTTGGTGTGAGGTGGG BLAST psRNATarget

Expression of miRNA 82


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)