miRNA 83 details

Id Micro83
SequenceCCCGCCTTGCATCAAGTGAA 
Annotated nameszma-miR168b-3p; 
Annotated pre-miRNANone

Targets of miRNA 83

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_224758; FTRINITY_DN56194_c3_g9_i1 45 64 TTCAGTTGATGCAAGGCGGG BLAST psRNATarget
Ll_transcript_124273; FTRINITY_DN53714_c5_g2_i4 943 962 TTTGCTTGATGCAGGGTGGA BLAST psRNATarget
Ll_transcript_74927; FTRINITY_DN55511_c1_g7_i1 172 191 TTCGCTTGGTGCAGGTCGGG BLAST psRNATarget
Ll_transcript_224768; FTRINITY_DN56194_c3_g12_i1 36 55 TTCGCTTGGTGCAGGTCGGG BLAST psRNATarget
Ll_transcript_74930; FTRINITY_DN55511_c1_g2_i3 117 136 TTCGCTTGGTGCAGGTCGGG BLAST psRNATarget
Ll_transcript_74922; FTRINITY_DN55511_c1_g2_i1 120 139 TTCGCTTGGTGCAGGTCGGG BLAST psRNATarget
Ll_transcript_74929; FTRINITY_DN55511_c1_g2_i2 120 139 TTCGCTTGGTGCAGGTCGGG BLAST psRNATarget
Ll_transcript_164589; FTRINITY_DN53260_c1_g1_i6 568 587 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_164590; FTRINITY_DN53260_c1_g1_i7 568 587 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_164588; FTRINITY_DN53260_c1_g1_i5 568 587 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_164578; FTRINITY_DN53260_c1_g1_i1 1937 1956 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_164583; FTRINITY_DN53260_c1_g1_i4 568 587 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_164579; FTRINITY_DN53260_c1_g1_i2 1937 1956 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_164600; FTRINITY_DN53260_c1_g1_i11 1937 1956 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_237260; FTRINITY_DN54416_c2_g1_i5 1507 1526 TCCATTTGCTGCAAGGTGGG BLAST psRNATarget
Ll_transcript_237253; FTRINITY_DN54416_c2_g1_i1 1633 1652 TCCATTTGCTGCAAGGTGGG BLAST psRNATarget
Ll_transcript_237256; FTRINITY_DN54416_c2_g1_i3 1639 1658 TCCATTTGCTGCAAGGTGGG BLAST psRNATarget
Ll_transcript_237265; FTRINITY_DN54416_c2_g1_i9 1765 1784 TCCATTTGCTGCAAGGTGGG BLAST psRNATarget
Ll_transcript_83854; FTRINITY_DN56688_c0_g2_i17 464 483 GTCATTTGATGCAAGGAAGG BLAST psRNATarget
Ll_transcript_202055; FTRINITY_DN56443_c1_g1_i5 129 148 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_83836; FTRINITY_DN56688_c0_g2_i7 464 483 GTCATTTGATGCAAGGAAGG BLAST psRNATarget
Ll_transcript_83860; FTRINITY_DN56688_c0_g2_i21 464 483 GTCATTTGATGCAAGGAAGG BLAST psRNATarget
Ll_transcript_83833; FTRINITY_DN56688_c0_g2_i5 570 589 GTCATTTGATGCAAGGAAGG BLAST psRNATarget
Ll_transcript_83831; FTRINITY_DN56688_c0_g2_i3 570 589 GTCATTTGATGCAAGGAAGG BLAST psRNATarget
Ll_transcript_202051; FTRINITY_DN56443_c1_g1_i2 129 148 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_202057; FTRINITY_DN56443_c1_g1_i7 308 327 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_202053; FTRINITY_DN56443_c1_g1_i4 129 148 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_202056; FTRINITY_DN56443_c1_g1_i6 308 327 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_202052; FTRINITY_DN56443_c1_g1_i3 129 148 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_194593; FTRINITY_DN50619_c0_g1_i3 654 673 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194605; FTRINITY_DN50619_c0_g1_i15 727 746 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194596; FTRINITY_DN50619_c0_g1_i6 743 762 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194603; FTRINITY_DN50619_c0_g1_i13 806 825 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194591; FTRINITY_DN50619_c0_g1_i1 985 1004 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194599; FTRINITY_DN50619_c0_g1_i9 1480 1499 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194608; FTRINITY_DN50619_c0_g1_i18 2420 2439 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194598; FTRINITY_DN50619_c0_g1_i8 2436 2455 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194607; FTRINITY_DN50619_c0_g1_i17 2499 2518 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194604; FTRINITY_DN50619_c0_g1_i14 2678 2697 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194595; FTRINITY_DN50619_c0_g1_i5 2879 2898 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194601; FTRINITY_DN50619_c0_g1_i11 2895 2914 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194594; FTRINITY_DN50619_c0_g1_i4 2958 2977 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194606; FTRINITY_DN50619_c0_g1_i16 3137 3156 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194592; FTRINITY_DN50619_c0_g1_i2 3173 3192 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_194602; FTRINITY_DN50619_c0_g1_i12 3632 3651 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_260915; FTRINITY_DN50896_c0_g1_i8 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_260919; FTRINITY_DN50896_c0_g1_i12 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_260908; FTRINITY_DN50896_c0_g1_i1 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_260914; FTRINITY_DN50896_c0_g1_i7 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_260911; FTRINITY_DN50896_c0_g1_i4 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_260910; FTRINITY_DN50896_c0_g1_i3 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_260913; FTRINITY_DN50896_c0_g1_i6 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_260917; FTRINITY_DN50896_c0_g1_i10 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_260909; FTRINITY_DN50896_c0_g1_i2 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_454887; TRINITY_DN49716_c0_g5_i1 181 200 TTCGCTTGGTGCAGGTCGGG BLAST psRNATarget
Ll_transcript_454914; TRINITY_DN49716_c0_g5_i6 181 200 TTCGCTTGGTGCAGGTCGGG BLAST psRNATarget
Ll_transcript_454889; TRINITY_DN49716_c0_g5_i2 155 174 TTCGCTTGGTGCAGGTCGGG BLAST psRNATarget
Ll_transcript_454894; TRINITY_DN49716_c0_g5_i3 155 174 TTCGCTTGGTGCAGGTCGGG BLAST psRNATarget
Ll_transcript_454895; TRINITY_DN49716_c0_g5_i4 119 138 TTCGCTTGGTGCAGGTCGGG BLAST psRNATarget
Ll_transcript_335488; TRINITY_DN44719_c0_g1_i1 474 493 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_335497; TRINITY_DN44719_c0_g1_i10 474 493 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_335493; TRINITY_DN44719_c0_g1_i6 573 592 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_335490; TRINITY_DN44719_c0_g1_i3 573 592 GTTATTCGATGCAAGGCGGA BLAST psRNATarget
Ll_transcript_483281; TRINITY_DN49361_c0_g3_i3 118 136 ATCACTGATGTGAGGCGGG BLAST psRNATarget
Ll_transcript_483278; TRINITY_DN49361_c0_g3_i2 118 136 ATCACTGATGTGAGGCGGG BLAST psRNATarget
Ll_transcript_483282; TRINITY_DN49361_c0_g3_i4 118 136 ATCACTGATGTGAGGCGGG BLAST psRNATarget
Ll_transcript_448614; TRINITY_DN55751_c0_g1_i1 174 193 TAGATTTGATGTAAGGTGGG BLAST psRNATarget
Ll_transcript_452601; TRINITY_DN54389_c0_g1_i1 107 126 TCCATTTGCTGCAAGGTGGG BLAST psRNATarget
Ll_transcript_285781; TRINITY_DN48808_c0_g1_i1 411 430 GTCATTTGATGCAAGGAAGG BLAST psRNATarget
Ll_transcript_309939; TRINITY_DN47121_c0_g4_i3 278 297 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_309937; TRINITY_DN47121_c0_g4_i2 278 297 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_309934; TRINITY_DN47121_c0_g1_i3 153 172 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_309933; TRINITY_DN47121_c0_g1_i2 153 172 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_309931; TRINITY_DN47121_c0_g1_i1 153 172 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_309940; TRINITY_DN47121_c0_g1_i4 153 172 TTCAGCTGGTGCAAGGCGGT BLAST psRNATarget
Ll_transcript_283456; TRINITY_DN44649_c0_g1_i8 276 295 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283451; TRINITY_DN44649_c0_g1_i3 735 754 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283449; TRINITY_DN44649_c0_g1_i1 868 887 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283459; TRINITY_DN44649_c0_g1_i11 1126 1145 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283455; TRINITY_DN44649_c0_g1_i7 1621 1640 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283460; TRINITY_DN44649_c0_g1_i12 1647 1666 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_283457; TRINITY_DN44649_c0_g1_i9 2106 2125 AAGAGTTGATGCAAGGTGGG BLAST psRNATarget
Ll_transcript_437398; TRINITY_DN48913_c1_g1_i11 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437392; TRINITY_DN48913_c1_g1_i5 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437394; TRINITY_DN48913_c1_g1_i7 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437391; TRINITY_DN48913_c1_g1_i4 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437397; TRINITY_DN48913_c1_g1_i10 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437390; TRINITY_DN48913_c1_g1_i3 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437395; TRINITY_DN48913_c1_g1_i8 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437400; TRINITY_DN48913_c1_g1_i13 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437388; TRINITY_DN48913_c1_g1_i1 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437389; TRINITY_DN48913_c1_g1_i2 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437396; TRINITY_DN48913_c1_g1_i9 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget
Ll_transcript_437393; TRINITY_DN48913_c1_g1_i6 737 756 GTCACGTGATGAGAGGTGGG BLAST psRNATarget

Expression of miRNA 83


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)