Transcript | Ll_transcript_511036 |
---|---|
CDS coordinates | 558-2513 (+) |
Peptide sequence | MSFLVNVYAKCGNMEDARKVFDKMPRRNVVAWSTLLVGYVKNSQPKHAIHVFHEMLYSGSYPSNFALAIALNACTSLHSLKLGDQFHAYIIKYHIDYDTSIGNALCSLYSRSHKLKLALKAFRRIDEKNVISWTTAISACGDNGEAMKGLNLFVEMLSEGIQPNEFTLTSALSQCCEILYLELGTQVHSLCTKFGYDLNLRVRNSMLYLYLKCGCISEAQILFHGMDDLSLVSWNAMISGHAQMMELAKDNLSLCQSGNEALNLFSKLNRSGMKPDLFTLSSVLSVCSRLLVLEQGEQIHAQAIKTGFLADVVVSTSLINMYNKCGSIERASKAFLEMSTRTMISWTSMIAGFALHGRYQQALQLFEDMRLAGVRPNAVTFVGVLSACGHAGMASEALDYVEIMQKEYKIKPMMDHYTCLIDMFVRLGRLEDAFNLIKKMDFEPSEFIWSNLIEGCRSHGNLELGYQAAEQLLSLKPKDSETYLLLLNLYLSAGKFKDVSRVKEMMKEENVRKLKDWSWISIKDKVYSFEPNDKAHPESSLLYKSLEDLLAKAKNIGYEMLESVGINEEEEKILSPAVYHSEKLAITCGLEKLPYSSAVRVMKSTLMCRDCHNFIKYVSTLTGREIIVKDSKRLHKFVNGQCSCGDFGCFL* |
ORF Type | complete |
Blastp | Pentatricopeptide repeat-containing protein At2g27610 from Arabidopsis with 36.66% of identity |
---|---|
Blastx | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic from Arabidopsis with 35.61% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT2G27610) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431389.1) |
Pfam | PPR repeat (PF01535.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer