ta-siRNA 85 details

ID85
SequenceATCCACAATGAATCTACTGAGCGT 

Targets of siRNA 85

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_121293; 256 279 CCGCTCAGCAGATTCATTGTGGAT BLAST
Ll_transcript_90465; 590 613 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_10151; 55 78 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58549; 1120 1143 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58550; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58556; 1120 1143 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58536; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58565; 1120 1143 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58545; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58563; 1120 1143 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58530; 1120 1143 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58569; 1206 1229 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58591; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58588; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58542; 1253 1276 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58590; 1120 1143 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58572; 1120 1143 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58557; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58538; 1120 1143 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58567; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58571; 1120 1143 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58562; 1206 1229 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58560; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58532; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58553; 1253 1276 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58543; 1206 1229 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58531; 1206 1229 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58575; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58564; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_58581; 1167 1190 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_274872; 343 366 ACATTCAGTAGATTCATAGTGGAT BLAST
Ll_transcript_130463; 182 205 ACGCTCAGTGGATTCATGGTGGAT BLAST
Ll_transcript_262541; 46 69 ACGCTCAGTGGATTCATCGTGGAT BLAST
Ll_transcript_182287; 226 249 ACACTCAATAGATTCATGGTGGAT BLAST
Ll_transcript_140812; 19 42 ACACTCAATAGATTCATGGTGGAT BLAST
Ll_transcript_263117; 328 351 ACACCCAGTGGATTCATGGTGGAT BLAST
Ll_transcript_26355; 1441 1464 ATGTCAGGTAAATTCATTGTGGAT BLAST
Ll_transcript_26360; 2530 2553 ATGTCAGGTAAATTCATTGTGGAT BLAST
Ll_transcript_26344; 2990 3013 ATGTCAGGTAAATTCATTGTGGAT BLAST
Ll_transcript_367438; 409 432 CCGCTCAGCAGATTCATTGTGGAT BLAST
Ll_transcript_291844; 209 232 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_291835; 282 305 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_291838; 70 93 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_359273; 37 60 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_359261; 37 60 ACGCTCAGTAGATTCATCGTGGAT BLAST
Ll_transcript_359606; 365 388 ACATTCAGTAGATTCATAGTGGAT BLAST
Ll_transcript_392971; 74 97 ACGCTCAGTAAATTCATGGTGGAT BLAST
Ll_transcript_284876; 2 25 ACACTCAGTGGATTCATCGTGGAT BLAST
Ll_transcript_284874; 2 25 ACACTCAGTGGATTCATCGTGGAT BLAST
Ll_transcript_284867; 2 25 ACACTCAGTGGATTCATCGTGGAT BLAST
Ll_transcript_490967; 1567 1590 ACACCCAGTGGATTCATGGTGGAT BLAST
Ll_transcript_490984; 1650 1673 ACACCCAGTGGATTCATGGTGGAT BLAST
Ll_transcript_384855; 1467 1490 ATGTCAGGTAAATTCATTGTGGAT BLAST
Ll_transcript_384860; 1786 1809 ATGTCAGGTAAATTCATTGTGGAT BLAST
Ll_transcript_384857; 2556 2579 ATGTCAGGTAAATTCATTGTGGAT BLAST

Expression of siRNA 85


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)