Transcript | Ll_transcript_496836 |
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CDS coordinates | 1204-3867 (+) |
Peptide sequence | MVHTVQELYGSNVAGNLLSALSRLFTNFLQMHGFTCGVDDLLITEEKDGERMAQLESCEEIGDIVHREFVGVMDNARLDPITLQLNIEKKIRSNGEAALTYLDRKMISNLNTRTSSGILKELLSEGILKSSGKNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFTPWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVSYDHTVRDSDGSVIQFHYGEDGVDVHQTSFITKFEALSTNKELVNSNFCRQLDKSSPYINKLPDALERKAKKFIREKQRNTGSIKRSDFLKLMEHKYISSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPFMSCPLTLIPEKSMEDAIRLADKLKKITVADIIENMEVSVVPVAVLDGQICSIYKLEMKLYKPKHYPKYTDITIADWEETLSVVFVRELEDAIENHMSLLSKISGIQNFKSDPQSSSSNGSEDVDSNGLESEKKGHNNDEDDEDGGEDTEGADDLGSDAQKRKQQGTDEVDYEDGAEEDTHDGELSEDFEDDEGVGDVKVNEDGRHVIVNDNDSDIEFSEGGENVPNDANNSHEHGMQSKPKSTNEKNNLESGKKKSESTTKKFDRRFFVEAKGMNFKIHFKFINEPHILLAQIAQKSAKKVCIQKFGKVGECKAITCKESGVLYNGEDEGKKDAEKIPALQTSGIHFQTFWELQDDLDVNYVYSNNVSEMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHSGSYRPMSRMGSIADSTSPFIKMCFETASKFIVEAAYHGQVDTLETPSARVCLGLPVKMGTGCHELIQKVEI* |
ORF Type | complete |
Blastp | DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 55.76% of identity |
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Blastx | DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 56.35% of identity |
Eggnog | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086) |
Kegg | Link to kegg annotations (AT3G57660) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421167.1) |
Pfam | RNA polymerase Rpb1, domain 3 (PF04983.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer