Protein coding transcript 86161

TranscriptLl_transcript_496836
CDS coordinates1204-3867 (+)
Peptide sequenceMVHTVQELYGSNVAGNLLSALSRLFTNFLQMHGFTCGVDDLLITEEKDGERMAQLESCEEIGDIVHREFVGVMDNARLDPITLQLNIEKKIRSNGEAALTYLDRKMISNLNTRTSSGILKELLSEGILKSSGKNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFTPWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVSYDHTVRDSDGSVIQFHYGEDGVDVHQTSFITKFEALSTNKELVNSNFCRQLDKSSPYINKLPDALERKAKKFIREKQRNTGSIKRSDFLKLMEHKYISSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPFMSCPLTLIPEKSMEDAIRLADKLKKITVADIIENMEVSVVPVAVLDGQICSIYKLEMKLYKPKHYPKYTDITIADWEETLSVVFVRELEDAIENHMSLLSKISGIQNFKSDPQSSSSNGSEDVDSNGLESEKKGHNNDEDDEDGGEDTEGADDLGSDAQKRKQQGTDEVDYEDGAEEDTHDGELSEDFEDDEGVGDVKVNEDGRHVIVNDNDSDIEFSEGGENVPNDANNSHEHGMQSKPKSTNEKNNLESGKKKSESTTKKFDRRFFVEAKGMNFKIHFKFINEPHILLAQIAQKSAKKVCIQKFGKVGECKAITCKESGVLYNGEDEGKKDAEKIPALQTSGIHFQTFWELQDDLDVNYVYSNNVSEMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHSGSYRPMSRMGSIADSTSPFIKMCFETASKFIVEAAYHGQVDTLETPSARVCLGLPVKMGTGCHELIQKVEI*
ORF Typecomplete

Annotations of Ll_transcript_496836

BlastpDNA-directed RNA polymerase I subunit 1 from Arabidopsis with 55.76% of identity
BlastxDNA-directed RNA polymerase I subunit 1 from Arabidopsis with 56.35% of identity
EggnogDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
KeggLink to kegg annotations (AT3G57660)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421167.1)
PfamRNA polymerase Rpb1, domain 3 (PF04983.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer