Transcript | Ll_transcript_489002 |
---|---|
CDS coordinates | 162-1244 (+) |
Peptide sequence | MVGNGGSLSAMSLPMLTEKNWDRWCTQMRVLFNYQEVCEVVENGFVIPDPGATDVQRAMYKETQKKDNKALFLLHQCVDDIHFEKIQQATTAKDAWEILIRSHSGGDKIRKVKLQALRRQYEMLHMEENDRVGEYFTKVLTLSNQMKGCGESVSDLMVVEKIMRSLPQKFDFIVVAIEESKDVNSMKIEELQSSLEAHELRLLERNPIRSSEQALKFTHHRDNEIRRNRRWKGKKSGGDHDPAESSDRRGWTTRKNQKQKKFDKNNVECYNYHKAGHYAYECSAEKRKKNHQHDKEAYKVQEESEEEPLTLMVTNSAEHNHESWYLDSGCSNHMTSHKEWLIDFDSSRKSKVKFAYDSTL* |
ORF Type | complete |
Blastp | - |
---|---|
Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 25.68% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433850.1) |
Pfam | gag-polypeptide of LTR copia-type (PF14223.5) |
Rfam | - |
GO | - |
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Alignmet by MSA Viewer