miRNA 87 details

Id Micro87
SequenceCCGTATCTTGGCCTTGTCATT 
Annotated namesath-miR5024-3p; 
Annotated pre-miRNANone

Targets of miRNA 87

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_21635; FTRINITY_DN55178_c0_g5_i1 147 167 AGTGATAAGGCTGAGATAAGG BLAST psRNATarget
Ll_transcript_21651; FTRINITY_DN55178_c0_g5_i4 147 167 AGTGATAAGGCTGAGATAAGG BLAST psRNATarget
Ll_transcript_21637; FTRINITY_DN55178_c0_g5_i2 147 167 AGTGATAAGGCTGAGATAAGG BLAST psRNATarget
Ll_transcript_21644; FTRINITY_DN55178_c0_g5_i3 147 167 AGTGATAAGGCTGAGATAAGG BLAST psRNATarget
Ll_transcript_94506; FTRINITY_DN54820_c2_g1_i3 675 695 ACTGACAAGTTCAAGATGTGG BLAST psRNATarget
Ll_transcript_94517; FTRINITY_DN54820_c2_g1_i5 1134 1154 ACTGACAAGTTCAAGATGTGG BLAST psRNATarget
Ll_transcript_94513; FTRINITY_DN54820_c2_g1_i4 1365 1385 ACTGACAAGTTCAAGATGTGG BLAST psRNATarget
Ll_transcript_94522; FTRINITY_DN54820_c2_g1_i6 1645 1665 ACTGACAAGTTCAAGATGTGG BLAST psRNATarget
Ll_transcript_94503; FTRINITY_DN54820_c2_g1_i1 1876 1896 ACTGACAAGTTCAAGATGTGG BLAST psRNATarget
Ll_transcript_14954; FTRINITY_DN59239_c1_g1_i2 544 564 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_14959; FTRINITY_DN59239_c1_g1_i4 544 564 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_14963; FTRINITY_DN59239_c1_g1_i5 420 440 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_14958; FTRINITY_DN59239_c1_g1_i3 544 564 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_14968; FTRINITY_DN59239_c1_g1_i7 764 784 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_14965; FTRINITY_DN59239_c1_g1_i6 774 794 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_14951; FTRINITY_DN59239_c1_g1_i1 358 378 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_190359; FTRINITY_DN56707_c3_g1_i3 421 441 AATTGCAAGGCCAAAATATGG BLAST psRNATarget
Ll_transcript_190352; FTRINITY_DN56707_c3_g1_i1 615 635 AATTGCAAGGCCAAAATATGG BLAST psRNATarget
Ll_transcript_190360; FTRINITY_DN56707_c3_g1_i4 797 817 AATTGCAAGGCCAAAATATGG BLAST psRNATarget
Ll_transcript_190356; FTRINITY_DN56707_c3_g1_i2 805 825 AATTGCAAGGCCAAAATATGG BLAST psRNATarget
Ll_transcript_272604; FTRINITY_DN54239_c3_g1_i4 1094 1114 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_272599; FTRINITY_DN54239_c3_g1_i1 1199 1219 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_272603; FTRINITY_DN54239_c3_g1_i3 1681 1701 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_272609; FTRINITY_DN54239_c3_g1_i7 1681 1701 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_272610; FTRINITY_DN54239_c3_g1_i8 1681 1701 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_272605; FTRINITY_DN54239_c3_g1_i5 2071 2091 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_267234; FTRINITY_DN55836_c2_g1_i1 1812 1832 TATGACGAGTTCAAGATACGT BLAST psRNATarget
Ll_transcript_218259; FTRINITY_DN56380_c0_g3_i1 2225 2245 CATGATGGGGCTGAGGTATGG BLAST psRNATarget
Ll_transcript_270305; FTRINITY_DN22704_c0_g2_i1 188 208 GATGACATGGCCGAGGTACTG BLAST psRNATarget
Ll_transcript_80682; FTRINITY_DN58115_c1_g1_i18 1083 1103 TATGATGATGCCGAGATATGG BLAST psRNATarget
Ll_transcript_80675; FTRINITY_DN58115_c1_g1_i12 1083 1103 TATGATGATGCCGAGATATGG BLAST psRNATarget
Ll_transcript_134426; FTRINITY_DN58064_c3_g1_i5 1357 1377 ATTGATAAGGCAAAGATACCG BLAST psRNATarget
Ll_transcript_326351; TRINITY_DN48011_c0_g3_i3 154 174 AGTGATAAGGCTGAGATAAGG BLAST psRNATarget
Ll_transcript_326350; TRINITY_DN48011_c0_g3_i2 154 174 AGTGATAAGGCTGAGATAAGG BLAST psRNATarget
Ll_transcript_326358; TRINITY_DN48011_c0_g3_i10 154 174 AGTGATAAGGCTGAGATAAGG BLAST psRNATarget
Ll_transcript_294424; TRINITY_DN53808_c0_g1_i1 250 270 CATGACCGGGTCAGGATATGG BLAST psRNATarget
Ll_transcript_476822; TRINITY_DN47471_c4_g1_i1 45 65 CCTGATAAGGTCAAGGTATGT BLAST psRNATarget
Ll_transcript_452457; TRINITY_DN43291_c0_g1_i1 177 197 CCAGACAAGGCCAAGGCACGG BLAST psRNATarget
Ll_transcript_452458; TRINITY_DN43291_c0_g1_i2 177 197 CCAGACAAGGCCAAGGCACGG BLAST psRNATarget
Ll_transcript_335174; TRINITY_DN44717_c0_g1_i2 303 323 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_335175; TRINITY_DN44717_c0_g1_i3 309 329 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_493195; TRINITY_DN52812_c4_g1_i5 43 63 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_493190; TRINITY_DN52812_c4_g1_i2 474 494 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_493196; TRINITY_DN52812_c4_g1_i6 474 494 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_493198; TRINITY_DN52812_c4_g1_i8 474 494 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_493192; TRINITY_DN52812_c4_g1_i3 648 668 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_493197; TRINITY_DN52812_c4_g1_i7 648 668 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_493194; TRINITY_DN52812_c4_g1_i4 648 668 AATGACAAGTCAAAGATATGG BLAST psRNATarget
Ll_transcript_483762; TRINITY_DN49340_c2_g2_i4 441 461 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_334026; TRINITY_DN42968_c0_g1_i1 729 749 AATTGCAAGGCCAAAATATGG BLAST psRNATarget
Ll_transcript_334028; TRINITY_DN42968_c0_g1_i2 813 833 AATTGCAAGGCCAAAATATGG BLAST psRNATarget
Ll_transcript_334029; TRINITY_DN42968_c0_g1_i3 1103 1123 AATTGCAAGGCCAAAATATGG BLAST psRNATarget
Ll_transcript_483759; TRINITY_DN49340_c2_g2_i2 702 722 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_483787; TRINITY_DN49340_c2_g2_i9 1056 1076 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_483776; TRINITY_DN49340_c2_g2_i6 702 722 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_483779; TRINITY_DN49340_c2_g2_i8 1056 1076 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_483771; TRINITY_DN49340_c2_g2_i5 1446 1466 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_483778; TRINITY_DN49340_c2_g2_i7 1446 1466 GATGACGAGCCCAAGATACTG BLAST psRNATarget
Ll_transcript_280172; TRINITY_DN50157_c2_g3_i1 2031 2051 CATGGCGAGGTCAAGGTATGT BLAST psRNATarget
Ll_transcript_452019; TRINITY_DN40790_c0_g1_i1 26 46 GGTGACAGGGTCAAGACGTGG BLAST psRNATarget
Ll_transcript_518528; TRINITY_DN51280_c2_g1_i6 518 538 TATGATGATGCCGAGATATGG BLAST psRNATarget
Ll_transcript_525664; TRINITY_DN47567_c1_g2_i6 1417 1437 GATGACATGGCCGAGGTACTG BLAST psRNATarget
Ll_transcript_391983; TRINITY_DN46482_c0_g1_i3 646 666 GACGACATGGCCAGGATACGA BLAST psRNATarget
Ll_transcript_288933; TRINITY_DN51331_c0_g2_i20 174 194 ATTGATAAGGCAAAGATACCG BLAST psRNATarget
Ll_transcript_288913; TRINITY_DN51331_c0_g2_i1 174 194 ATTGATAAGGCAAAGATACCG BLAST psRNATarget
Ll_transcript_288928; TRINITY_DN51331_c0_g2_i15 671 691 ATTGATAAGGCAAAGATACCG BLAST psRNATarget

Expression of miRNA 87


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)