Transcript | Ll_transcript_433008 |
---|---|
CDS coordinates | 106-1983 (+) |
Peptide sequence | MIMAPSSISLNSNIWAKPQLPHALFSYSSSIFDLGFPTKSTITLKMKPITKPNNAIQCALHTHPVFNFPKQPYNKTLITKEKTLPDTDTKTETHNPTTPLRNPFQRVAATALDMFESALLSREQNQPLPKTTDPRVQICGNFAPVPEQPVTHSLPVTGTIPEAVNGVYLRNGANPMFEPTAGHHLFDGDGMVHAVTINDGAASYACRFTETERLVQEKKLGRAMFPKAIGELHGHSGILRLLLFYARGLAGIVDHRHGAGVANAGLIFFNGKLLAMSEDDLPYELQITSSGDLKTVGRFNFSGQLNSAMIAHPKLDPISGELFALSYDVTKPYLKYFRFSPEGEKSPDVEIRLSVPTMTHDFAITENFVVIPDQQVVFKLPEMIKGGSPVKYDGAKKSRFGILPKYAKDESSVIWVEAEDTFCFHFWNAWEETETNEVVVIGSCMTPPDSIFNESDEHLKSVLSEIRLNLKTGKSTRRSIIPEINGHVMNLEVGMVNRNRLGRKTRFAYLAIAEPWPKISGFAKVDLLTGELKSHNYGDNRYGGEPFFLPKNDDFCEEDDGYILAYVHDESTWESELQIVNAMDLKVEATVKLPSRVPYGFHGTFVEAKDLAKQSQTLSHTKRDC* |
ORF Type | complete |
Blastp | Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic from Arabidopsis with 66.61% of identity |
---|---|
Blastx | Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic from Arabidopsis with 64.72% of identity |
Eggnog | dioxygenase(COG3670) |
Kegg | Link to kegg annotations (AT1G30100) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462498.1) |
Pfam | Retinal pigment epithelial membrane protein (PF03055.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer