Protein coding transcript 871

TranscriptLl_transcript_433008
CDS coordinates106-1983 (+)
Peptide sequenceMIMAPSSISLNSNIWAKPQLPHALFSYSSSIFDLGFPTKSTITLKMKPITKPNNAIQCALHTHPVFNFPKQPYNKTLITKEKTLPDTDTKTETHNPTTPLRNPFQRVAATALDMFESALLSREQNQPLPKTTDPRVQICGNFAPVPEQPVTHSLPVTGTIPEAVNGVYLRNGANPMFEPTAGHHLFDGDGMVHAVTINDGAASYACRFTETERLVQEKKLGRAMFPKAIGELHGHSGILRLLLFYARGLAGIVDHRHGAGVANAGLIFFNGKLLAMSEDDLPYELQITSSGDLKTVGRFNFSGQLNSAMIAHPKLDPISGELFALSYDVTKPYLKYFRFSPEGEKSPDVEIRLSVPTMTHDFAITENFVVIPDQQVVFKLPEMIKGGSPVKYDGAKKSRFGILPKYAKDESSVIWVEAEDTFCFHFWNAWEETETNEVVVIGSCMTPPDSIFNESDEHLKSVLSEIRLNLKTGKSTRRSIIPEINGHVMNLEVGMVNRNRLGRKTRFAYLAIAEPWPKISGFAKVDLLTGELKSHNYGDNRYGGEPFFLPKNDDFCEEDDGYILAYVHDESTWESELQIVNAMDLKVEATVKLPSRVPYGFHGTFVEAKDLAKQSQTLSHTKRDC*
ORF Typecomplete

Annotations of Ll_transcript_433008

BlastpProbable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic from Arabidopsis with 66.61% of identity
BlastxProbable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic from Arabidopsis with 64.72% of identity
Eggnogdioxygenase(COG3670)
KeggLink to kegg annotations (AT1G30100)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019462498.1)
PfamRetinal pigment epithelial membrane protein (PF03055.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer