Transcript | Ll_transcript_488891 |
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CDS coordinates | 946-3180 (+) |
Peptide sequence | MKGRLSSLMKFPLYFRGITNVLEILESSFKGTLSAQLHDLHHLHESILKAKQHLEIIIWCTRHHFLEDVESRFTDISSWASVVHKRKSEAIRRAWPDAINQSVESTGHIGSLFIEDALNSLDLEESLVQEIEGGLQVSSLQMDGTLSFRSKTDQVLSCYPFKNLRTAADLLFLHGSSDTVIAKQAIFLYYLYDRHWTIPDEQWRHIVEDFAATFSISRHSLLESLTFYLLDDHTEEALQEACRLLPEMSGPVSHPKIAEVLLERGSPDTALMVLRWTGRDSGPHMISLRDAVTAVRVRVECGLLTEAFMHQRVLWTRVKEKKFNKGALGDTSDKLKGQCSNWVEWVEALVAEICFLCIRRNLVDRMLELPWNSDEEKYIHKCLLDYAIENPHGTTGSLLVVFYIQRYRYSQAYQVHIRLENIEQDYISKGSISEEFLPRLETAIRWRANLVNRCLELLPETEQHKLRSGNLTEDTVTSHEEVEVPAKFDVPPIQDSRSTSLLIPSSANSSSMRHNDHTTGLLSSSTLGTSTKLGIPFPTTGPELGNFGSPSYRHEGLLISNESVANNRGKTGNVLRYDNTPTPRNRRIRFRNGSPLKGVNRTSPSSSQENKVEKIPPGVEHNLLFGNYQTTPHGRGAKAKHDTRSGRSYSKEFANDLPNMSSWNVKAHKDDRIWNVESTGDPMEVSQSYVEKKLDMGENINGGPRWRSDETSDEDEEQGLEKAMDIAHYATPTRTTRRSRFAMR* |
ORF Type | complete |
Blastp | E3 ubiquitin-protein ligase HOS1 from Arabidopsis with 45.05% of identity |
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Blastx | E3 ubiquitin-protein ligase HOS1 from Arabidopsis with 44.69% of identity |
Eggnog | e3 ubiquitin-protein ligase(ENOG4110YTD) |
Kegg | Link to kegg annotations (AT2G39810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423958.1) |
Pfam | Nuclear pore complex assembly (PF13934.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer