Transcript | Ll_transcript_489099 |
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CDS coordinates | 116-3127 (+) |
Peptide sequence | MNRQKSILSFFQKTAPGTDTSGGPRGSDSPVQQANRNKVTAASSHPPSDDVRGTDTPPEKVPRQILPASFAPKENNNLFESIMHKFVKVDDSEKVNHSSDVKSLPKPYSSLGICNDANHKVLQKEETGFQFQPMVKDGSISFKEKTNNRGLQKEEVALPFQPMVKDNGVNFTENISRKGLQKFQFQPMAKDNAVNFKEKTNQKNMVPVETDNDITVPETPGMQSLASHAKRGREDGSKSRSFLDSSKRVRFLEDFTETNMTKKEAEVASRFEWLDPSRIRDANGRRPNDPLYDRTTLYIPPEVLKKMTASQKQYWSVKCKYMDVMLFFKVGKFYELYEMDAEIGHKELDWKITLSGVGKCRQVGISESGIDDAVQNLVARGYKVGRVEQLETSEEAKARGANSVIMRKLAQVVTPSTSVDGDIGPDTNHLLTIKEENNDLDKGSVVYGFAFVDCARLRFWVGSIDDDASCSALGALLMQVSPKEIIYESRGLSKEAQKALRKFSLNGCTALQLTPVQSISELMNSEIHDLVHSKGYFKGSSHSLDNVLSKVTHREISVSALGGLIGHLDRLMLDDVLQDGDIYPYQVYTGCLKMDGQTLINLEIFGNNVDGGKSGTLYKYLDNCVTSSGKRLLRNWICRPLKDVEGLNNRLDVVDDLMAQPEIVSHIARHLHTLPDLELLLGRIKSSLHLSDPLLLPLLVKKILKRRVKVFGSLVRGLRTALSLLLLLQNEKPLILSLTKVFKLPILTGSDGLDQFLTQFEAAVDSDFPNYLNHDVTDSDAETLTILSELFLEKAAQWFEVVHAINCIDVLRSFAIISSFSSVRTMSRPVILPSSESASKDSGQPVLKMKGLWHPFAFGENGCSPVPNDIILGDNEAGNHPRTLLLTGPNMGGKSTLLRVTCLAVIMAQLGCYVPCENCVLSVVDIIFTRLGATDRIMAGESTFFIECSETASVLQNATQNSLVILDELGRGTSTFDGYAIAYAVSLCSSVLFIVLITPLVLF* |
ORF Type | complete |
Blastp | DNA mismatch repair protein MSH7 from Arabidopsis with 56.8% of identity |
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Blastx | DNA mismatch repair protein MSH7 from Arabidopsis with 56.8% of identity |
Eggnog | that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity)(COG0249) |
Kegg | Link to kegg annotations (AT3G24495) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436646.1) |
Pfam | MutS domain I (PF01624.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer