Transcript | Ll_transcript_347030 |
---|---|
CDS coordinates | 173-1105 (+) |
Peptide sequence | MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTILLSNMYQRPDMNAPIVDPNQSQSLDPDKVQDHFEDFYEDLFEELSKYGEIQSLNICDNLADHMVGNVYVQFKEEDHAANAVMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRFHDRSGSRSQSPPRNRKHEERSHSGRSSDRRDYDRHHDNHSGRGRLPRSRSPQRRGRRSRSPAGRDSRSVRESSAERRAKIEQWNREKELADSGNKNSSNGNDYEERDDAQNGSESGRH* |
ORF Type | complete |
Blastp | Splicing factor U2af small subunit B from Arabidopsis with 68.33% of identity |
---|---|
Blastx | Splicing factor U2af small subunit A from Oryza sativa with 77.18% of identity |
Eggnog | auxiliary factor(ENOG410Z5PX) |
Kegg | Link to kegg annotations (AT5G42820) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428850.1) |
Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer