Transcript | Ll_transcript_345819 |
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CDS coordinates | 2106-2939 (+) |
Peptide sequence | MWSSDIVITNITLRDSPFWTLHPYDCKNITIKHVTILAPVSKAPNTDGIDPDSCEDMLIEDCYISTGDDAIAIKSGWDQYGIAYGRPSKNIMIRNLVVRSMVSAGVSIGSEMSGGVFNVTVENLLVWDSRRAVRIKTAPGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDRTALPILKDISFITVHGHGVRVPVRIHGSEEIPVRNVTFQDMSIGLTYKKKHIFQCAFVQGRVIGAIFPAPCENLDRYNEQGQLVKHSASHNVTDIDYDF* |
ORF Type | complete |
Blastp | Probable polygalacturonase from Vitis with 41.79% of identity |
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Blastx | Probable polygalacturonase from Vitis with 42.05% of identity |
Eggnog | Glycoside hydrolase family 28(COG5434) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443391.1) |
Pfam | Glycosyl hydrolases family 28 (PF00295.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer