miRNA 92 details

Id Micro92
SequenceCGATCTTGAGGCAGGAACTGAG 
Annotated namesosa-miR1861b; osa-miR1861f; osa-miR1861i; osa-miR1861l; 
Annotated pre-miRNANone

Targets of miRNA 92

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_144937; FTRINITY_DN59026_c1_g1_i3 2126 2147 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_144943; FTRINITY_DN59026_c1_g1_i9 2538 2559 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_144955; FTRINITY_DN59026_c1_g1_i19 2674 2695 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_144959; FTRINITY_DN59026_c1_g1_i23 2827 2848 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_260233; FTRINITY_DN57996_c1_g3_i1 211 232 GTCAGTTCCTGTCTTAATATCG BLAST psRNATarget
Ll_transcript_97081; FTRINITY_DN47622_c0_g1_i2 810 831 CCAAGTTCTTGTTTCAGGATTG BLAST psRNATarget
Ll_transcript_97080; FTRINITY_DN47622_c0_g1_i1 1756 1777 CCAAGTTCTTGTTTCAGGATTG BLAST psRNATarget
Ll_transcript_12564; FTRINITY_DN69839_c0_g1_i1 53 74 TTCATTTGCTGCCTCAAGATCA BLAST psRNATarget
Ll_transcript_267759; FTRINITY_DN55870_c0_g2_i1 184 205 TTTAGTGCTTGCCTTAGGATTG BLAST psRNATarget
Ll_transcript_17913; FTRINITY_DN54517_c1_g3_i1 255 276 CTTACCTCCTGCTTTAAGATCG BLAST psRNATarget
Ll_transcript_3073; FTRINITY_DN78803_c0_g1_i1 430 451 AGCAGTTCTAGCCTCAAGATCA BLAST psRNATarget
Ll_transcript_109883; FTRINITY_DN55431_c1_g7_i1 1 22 TGTAGTTCTTGCTTCAATGTCG BLAST psRNATarget
Ll_transcript_65537; FTRINITY_DN55330_c3_g2_i5 251 272 TGCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_199164; FTRINITY_DN49981_c0_g1_i1 521 542 TGGTGTTCTTGCCTCAGGATCT BLAST psRNATarget
Ll_transcript_65524; FTRINITY_DN55330_c3_g2_i1 961 982 ACCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_65533; FTRINITY_DN55330_c3_g2_i4 1625 1646 TGCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_65525; FTRINITY_DN55330_c3_g2_i2 1918 1939 TGCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_72631; FTRINITY_DN56085_c2_g2_i9 230 251 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_72630; FTRINITY_DN56085_c2_g2_i8 230 251 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_72610; FTRINITY_DN56085_c2_g2_i3 230 251 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_72614; FTRINITY_DN56085_c2_g2_i5 230 251 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_72608; FTRINITY_DN56085_c2_g2_i2 230 251 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_72606; FTRINITY_DN56085_c2_g2_i1 230 251 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_72629; FTRINITY_DN56085_c2_g2_i7 230 251 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_72628; FTRINITY_DN56085_c2_g2_i6 230 251 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_72613; FTRINITY_DN56085_c2_g2_i4 230 251 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_28261; FTRINITY_DN52257_c0_g5_i1 143 164 TAGAGATCCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_179978; FTRINITY_DN53562_c0_g2_i1 79 100 TTCAGTTCCTCCTTTAAGATCT BLAST psRNATarget
Ll_transcript_270966; FTRINITY_DN85950_c0_g1_i1 54 75 CTTAGTTCTTGCTTCAGGTTTG BLAST psRNATarget
Ll_transcript_39103; FTRINITY_DN58995_c2_g1_i11 233 254 TTCAGTTCCTCCTTCACGATCG BLAST psRNATarget
Ll_transcript_39101; FTRINITY_DN58995_c2_g1_i9 260 281 TTCAGTTCCTCCTTCACGATCG BLAST psRNATarget
Ll_transcript_39099; FTRINITY_DN58995_c2_g1_i7 357 378 TTCAGTTCCTCCTTCACGATCG BLAST psRNATarget
Ll_transcript_101255; FTRINITY_DN54907_c1_g2_i2 435 456 CTTAGTTTTTGTCTCAAGAATG BLAST psRNATarget
Ll_transcript_101254; FTRINITY_DN54907_c1_g2_i1 435 456 CTTAGTTTTTGTCTCAAGAATG BLAST psRNATarget
Ll_transcript_39097; FTRINITY_DN58995_c2_g1_i6 260 281 TTCAGTTCCTCCTTCACGATCG BLAST psRNATarget
Ll_transcript_101258; FTRINITY_DN54907_c1_g2_i3 435 456 CTTAGTTTTTGTCTCAAGAATG BLAST psRNATarget
Ll_transcript_39110; FTRINITY_DN58995_c2_g1_i15 357 378 TTCAGTTCCTCCTTCACGATCG BLAST psRNATarget
Ll_transcript_101266; FTRINITY_DN54907_c1_g2_i4 435 456 CTTAGTTTTTGTCTCAAGAATG BLAST psRNATarget
Ll_transcript_11069; FTRINITY_DN56865_c1_g1_i1 149 170 TTCACTTTTTGCCTTAGGATTG BLAST psRNATarget
Ll_transcript_266569; FTRINITY_DN55884_c2_g2_i2 563 584 CTTATTTCTTGCTTTGAGATTG BLAST psRNATarget
Ll_transcript_171322; FTRINITY_DN57065_c1_g1_i11 1085 1106 CTAAGTTCCTGGGTCAAGATTG BLAST psRNATarget
Ll_transcript_171324; FTRINITY_DN57065_c1_g1_i13 1173 1194 CTAAGTTCCTGGGTCAAGATTG BLAST psRNATarget
Ll_transcript_171315; FTRINITY_DN57065_c1_g1_i5 1601 1622 CTAAGTTCCTGGGTCAAGATTG BLAST psRNATarget
Ll_transcript_109883; FTRINITY_DN55431_c1_g7_i1 343 364 AGTAGTTCTTGCTTCAATGTTG BLAST psRNATarget
Ll_transcript_206275; FTRINITY_DN51116_c0_g1_i1 480 501 TCCAGTTTCTGATTTAAGATTG BLAST psRNATarget
Ll_transcript_490722; TRINITY_DN50314_c0_g1_i6 715 736 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_490733; TRINITY_DN50314_c0_g1_i15 1303 1324 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_490721; TRINITY_DN50314_c0_g1_i5 1451 1472 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_490731; TRINITY_DN50314_c0_g1_i13 1877 1898 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_279622; TRINITY_DN50153_c1_g1_i2 762 783 CCAAGTTCTTGTTTCAGGATTG BLAST psRNATarget
Ll_transcript_279621; TRINITY_DN50153_c1_g1_i1 1708 1729 CCAAGTTCTTGTTTCAGGATTG BLAST psRNATarget
Ll_transcript_442558; TRINITY_DN47869_c0_g10_i1 198 219 AGTAGTTGCTGCCTCAGGGTTG BLAST psRNATarget
Ll_transcript_463149; TRINITY_DN52629_c0_g2_i4 158 179 TTTAGTGCTTGCCTTAGGATTG BLAST psRNATarget
Ll_transcript_388870; TRINITY_DN50921_c4_g1_i6 233 254 TGCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388873; TRINITY_DN50921_c4_g1_i8 289 310 ACCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388868; TRINITY_DN50921_c4_g1_i4 650 671 ACCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_525103; TRINITY_DN47592_c2_g1_i1 517 538 TGGTGTTCTTGCCTCAGGATCT BLAST psRNATarget
Ll_transcript_388877; TRINITY_DN50921_c4_g1_i11 1425 1446 ACCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388879; TRINITY_DN50921_c4_g1_i13 1680 1701 ACCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388874; TRINITY_DN50921_c4_g1_i9 1607 1628 TGCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388867; TRINITY_DN50921_c4_g1_i3 2584 2605 TGCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388866; TRINITY_DN50921_c4_g1_i2 2382 2403 TGCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388876; TRINITY_DN50921_c4_g1_i10 3001 3022 ACCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388869; TRINITY_DN50921_c4_g1_i5 2637 2658 TGCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388871; TRINITY_DN50921_c4_g1_i7 4031 4052 ACCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388878; TRINITY_DN50921_c4_g1_i12 3958 3979 TGCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_388865; TRINITY_DN50921_c4_g1_i1 4988 5009 TGCAGTTGCTGCCTCAAGCTTG BLAST psRNATarget
Ll_transcript_385130; TRINITY_DN47298_c0_g3_i2 562 583 TGAAGTTCTTGCCTTGGGATCC BLAST psRNATarget
Ll_transcript_385131; TRINITY_DN47298_c0_g3_i3 562 583 TGAAGTTCTTGCCTTGGGATCC BLAST psRNATarget
Ll_transcript_385127; TRINITY_DN47298_c0_g3_i1 562 583 TGAAGTTCTTGCCTTGGGATCC BLAST psRNATarget
Ll_transcript_330371; TRINITY_DN49000_c5_g1_i8 234 255 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_330369; TRINITY_DN49000_c5_g1_i6 234 255 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_330366; TRINITY_DN49000_c5_g1_i3 234 255 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_330370; TRINITY_DN49000_c5_g1_i7 234 255 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_330363; TRINITY_DN49000_c5_g1_i1 234 255 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_330367; TRINITY_DN49000_c5_g1_i4 234 255 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_330365; TRINITY_DN49000_c5_g1_i2 234 255 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_330372; TRINITY_DN49000_c5_g1_i9 234 255 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_330368; TRINITY_DN49000_c5_g1_i5 234 255 AATATTTCTTGCCTTAAGATCA BLAST psRNATarget
Ll_transcript_510871; TRINITY_DN36891_c0_g1_i1 6 27 TTCAGTTCCTCCTTTAAGATCT BLAST psRNATarget
Ll_transcript_411847; TRINITY_DN45053_c0_g1_i1 59 80 CTTAGTTCTTGCTTCAGGTTTG BLAST psRNATarget
Ll_transcript_282344; TRINITY_DN46104_c2_g4_i7 241 262 TTCAGTTCCTCCTTCACGATCG BLAST psRNATarget
Ll_transcript_282324; TRINITY_DN46104_c2_g4_i2 365 386 TTCAGTTCCTCCTTCACGATCG BLAST psRNATarget
Ll_transcript_282315; TRINITY_DN46104_c2_g4_i1 241 262 TTCAGTTCCTCCTTCACGATCG BLAST psRNATarget
Ll_transcript_282342; TRINITY_DN46104_c2_g4_i6 365 386 TTCAGTTCCTCCTTCACGATCG BLAST psRNATarget
Ll_transcript_405257; TRINITY_DN49545_c2_g2_i1 149 170 TTCACTTTTTGCCTTAGGATTG BLAST psRNATarget
Ll_transcript_299170; TRINITY_DN51586_c1_g2_i11 1500 1521 CTAAGTTCCTGGGTCAAGATTG BLAST psRNATarget
Ll_transcript_299158; TRINITY_DN51586_c1_g2_i7 1550 1571 CTAAGTTCCTGGGTCAAGATTG BLAST psRNATarget
Ll_transcript_491916; TRINITY_DN52801_c1_g1_i2 191 212 TCCAGTTTCTGATTTAAGATTG BLAST psRNATarget
Ll_transcript_491919; TRINITY_DN52801_c1_g1_i4 191 212 TCCAGTTTCTGATTTAAGATTG BLAST psRNATarget
Ll_transcript_491914; TRINITY_DN52801_c1_g1_i1 191 212 TCCAGTTTCTGATTTAAGATTG BLAST psRNATarget
Ll_transcript_491917; TRINITY_DN52801_c1_g1_i3 191 212 TCCAGTTTCTGATTTAAGATTG BLAST psRNATarget

Expression of miRNA 92


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)