miRNA 93 details

Id Micro93
SequenceCGATCTTGTGGCAGGAGCTGAG 
Annotated namesosa-miR1861n; 
Annotated pre-miRNANone

Targets of miRNA 93

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_123830; FTRINITY_DN53797_c0_g2_i3 1108 1129 ATCAGCTTATGCTACAAGATTG BLAST psRNATarget
Ll_transcript_123828; FTRINITY_DN53797_c0_g2_i2 1122 1143 ATCAGCTTATGCTACAAGATTG BLAST psRNATarget
Ll_transcript_123835; FTRINITY_DN53797_c0_g2_i4 1563 1584 ATCAGCTTATGCTACAAGATTG BLAST psRNATarget
Ll_transcript_217479; FTRINITY_DN56371_c1_g2_i13 454 475 TGCAGTTCTTGTCACAGGGTTG BLAST psRNATarget
Ll_transcript_221258; FTRINITY_DN52059_c0_g1_i1 1654 1675 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_221266; FTRINITY_DN52059_c0_g1_i9 1615 1636 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_221265; FTRINITY_DN52059_c0_g1_i8 1778 1799 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_221263; FTRINITY_DN52059_c0_g1_i6 1929 1950 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_221264; FTRINITY_DN52059_c0_g1_i7 1592 1613 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_221267; FTRINITY_DN52059_c0_g1_i10 1631 1652 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_221261; FTRINITY_DN52059_c0_g1_i4 1755 1776 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_221260; FTRINITY_DN52059_c0_g1_i3 1794 1815 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_221259; FTRINITY_DN52059_c0_g1_i2 1867 1888 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_221262; FTRINITY_DN52059_c0_g1_i5 1906 1927 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_224583; FTRINITY_DN44482_c0_g1_i1 220 241 AGAAGCTTCTGCTACAAGGTGG BLAST psRNATarget
Ll_transcript_17913; FTRINITY_DN54517_c1_g3_i1 255 276 CTTACCTCCTGCTTTAAGATCG BLAST psRNATarget
Ll_transcript_72229; FTRINITY_DN56021_c4_g2_i2 705 726 TTCGGCTGCTGCCATAAGATGG BLAST psRNATarget
Ll_transcript_236524; FTRINITY_DN54430_c4_g2_i11 177 198 GTTGGCTCCTACCATAAGATCC BLAST psRNATarget
Ll_transcript_196332; FTRINITY_DN54367_c3_g9_i1 24 45 ACCAGCTTCTGCTACAATATCA BLAST psRNATarget
Ll_transcript_25624; FTRINITY_DN53871_c0_g1_i10 402 423 AGCAGCTTCTGCCACAAGGACC BLAST psRNATarget
Ll_transcript_25618; FTRINITY_DN53871_c0_g1_i4 1247 1268 AGCAGCTTCTGCCACAAGGACC BLAST psRNATarget
Ll_transcript_25622; FTRINITY_DN53871_c0_g1_i8 1247 1268 AGCAGCTTCTGCCACAAGGACC BLAST psRNATarget
Ll_transcript_25615; FTRINITY_DN53871_c0_g1_i1 1247 1268 AGCAGCTTCTGCCACAAGGACC BLAST psRNATarget
Ll_transcript_131944; FTRINITY_DN57585_c0_g1_i1 780 801 CATAGCTTCTGCGACGAGATCT BLAST psRNATarget
Ll_transcript_187621; FTRINITY_DN90959_c0_g1_i1 75 96 GCCACCTCCGGCTACAAGGTCG BLAST psRNATarget
Ll_transcript_466359; TRINITY_DN49286_c1_g5_i1 1161 1182 ATCAGCTTATGCTACAAGATTG BLAST psRNATarget
Ll_transcript_466364; TRINITY_DN49286_c1_g5_i2 1286 1307 ATCAGCTTATGCTACAAGATTG BLAST psRNATarget
Ll_transcript_466372; TRINITY_DN49286_c1_g5_i6 1570 1591 ATCAGCTTATGCTACAAGATTG BLAST psRNATarget
Ll_transcript_422879; TRINITY_DN47931_c2_g1_i1 133 154 TCAAGTTCCTGCCACAAAATTG BLAST psRNATarget
Ll_transcript_452549; TRINITY_DN54360_c0_g1_i1 72 93 CGAGGCTGCTGCCGCGAGATCG BLAST psRNATarget
Ll_transcript_413759; TRINITY_DN45635_c0_g1_i6 1590 1611 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_413755; TRINITY_DN45635_c0_g1_i2 1629 1650 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_413756; TRINITY_DN45635_c0_g1_i3 1643 1664 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_413758; TRINITY_DN45635_c0_g1_i5 1663 1684 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_413762; TRINITY_DN45635_c0_g1_i9 1682 1703 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_413760; TRINITY_DN45635_c0_g1_i7 1702 1723 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_413761; TRINITY_DN45635_c0_g1_i8 1865 1886 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_413754; TRINITY_DN45635_c0_g1_i1 1904 1925 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_413757; TRINITY_DN45635_c0_g1_i4 1938 1959 CGCAGCTGCTGCTGCAAGATCA BLAST psRNATarget
Ll_transcript_397234; TRINITY_DN51988_c1_g1_i1 210 231 AGAAGCTTCTGCTACAAGGTGG BLAST psRNATarget
Ll_transcript_417081; TRINITY_DN41359_c0_g1_i1 161 182 TTCAGCTTCTGCGGCAAGATCT BLAST psRNATarget
Ll_transcript_491155; TRINITY_DN50354_c2_g1_i1 81 102 TTCGGTTCTTGCCGCGAGGTTG BLAST psRNATarget
Ll_transcript_505687; TRINITY_DN52564_c2_g2_i5 2331 2352 TTCGGTTCCTGCCATGGGGTTG BLAST psRNATarget
Ll_transcript_505683; TRINITY_DN52564_c2_g2_i3 2358 2379 TTCGGTTCCTGCCATGGGGTTG BLAST psRNATarget
Ll_transcript_505693; TRINITY_DN52564_c2_g2_i8 2548 2569 TTCGGTTCCTGCCATGGGGTTG BLAST psRNATarget
Ll_transcript_424580; TRINITY_DN47989_c1_g2_i7 463 484 ATCGGCTCCTCCCACAAGGTCA BLAST psRNATarget
Ll_transcript_505692; TRINITY_DN52564_c2_g2_i7 2331 2352 TTCGGTTCCTGCCATGGGGTTG BLAST psRNATarget
Ll_transcript_505696; TRINITY_DN52564_c2_g2_i10 2358 2379 TTCGGTTCCTGCCATGGGGTTG BLAST psRNATarget
Ll_transcript_505682; TRINITY_DN52564_c2_g2_i2 2545 2566 TTCGGTTCCTGCCATGGGGTTG BLAST psRNATarget
Ll_transcript_505689; TRINITY_DN52564_c2_g2_i6 2548 2569 TTCGGTTCCTGCCATGGGGTTG BLAST psRNATarget
Ll_transcript_424569; TRINITY_DN47989_c1_g2_i2 541 562 ATCGGCTCCTCCCACAAGGTCA BLAST psRNATarget
Ll_transcript_361868; TRINITY_DN48476_c3_g1_i19 655 676 TTCGGCTGCTGCCATAAGATGG BLAST psRNATarget
Ll_transcript_361851; TRINITY_DN48476_c3_g1_i2 668 689 TTCGGCTGCTGCCATAAGATGG BLAST psRNATarget
Ll_transcript_416126; TRINITY_DN49609_c1_g1_i5 1258 1279 AGCAGCTTCTGCCACAAGGACC BLAST psRNATarget
Ll_transcript_416130; TRINITY_DN49609_c1_g1_i8 1258 1279 AGCAGCTTCTGCCACAAGGACC BLAST psRNATarget
Ll_transcript_355048; TRINITY_DN49481_c0_g4_i1 641 662 CATAGCTTCTGCGACGAGATCT BLAST psRNATarget

Expression of miRNA 93


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)