Transcript | Ll_transcript_378339 |
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CDS coordinates | 442-2547 (+) |
Peptide sequence | MQGQRSTVGSLPETLEFDCGSTPSNTTVNPPIFWNNMQNQAENHIPDYILSPSEINSSYVNYINQDWQNLSGWSLGEPSSSNTQNEVNNNEQKRELGWSSSVSASAIGGPILERCFRPANALSLDNVITSYVPMHSSNSHLVSQSLNLNASLADNGSNNSHHAEHPNLSKSSGPINEHIPPITSSGSFMLPSGCNGFLIEDSDGRPGCSQDTRRVSRKRKAVERDSGQSSDVGSCSYSQNRDGSAWSTLPTQNYAGSSFRRTASAEQVNARLGLSMGNVTSESVLDTNVAGRSESFLRNCRLRINPSSQQNSIPPAAFPSGRVIRSNGVSSSTSTLQRIHPVDNSLDLRSVPPVDTTIPQSQPLRVHVPALPRNAQSFRWSVGSSSTNNHSSNSVISATRDNLPQQEASSRSMARNILEQSIFLPPTNLRNLVRNPAIRASSSANLSIPGNVTSSQPGSNSAINPPSVSPWVSQPNPQQHYPRRLAEYVQRPMFSPGSEAAGNPISNYSSLRSPAISSGLSSGVVHLGSSSVLERPGDSEYAIAPSLRSLPGAGSGRIVSELRDVLGRMRRGRNLRLEDVMILNQSLFPGIADNHDRHRDMRLDVDNMSYEELLALEERIGNVCTGLSEETVLKHLKQKKYSVETGSQHEAEPCCICQEEYKDGDDMGSLNCGHDFHMDCVKQWLMHKNLCPICKTTGLAT* |
ORF Type | complete |
Blastp | Probable E3 ubiquitin-protein ligase RHG1A from Arabidopsis with 37.28% of identity |
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Blastx | Probable E3 ubiquitin-protein ligase RHG1A from Arabidopsis with 35.81% of identity |
Eggnog | zinc ion binding(ENOG41121N2) |
Kegg | Link to kegg annotations (AT5G42940) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436945.1) |
Pfam | RING-H2 zinc finger domain (PF12678.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer