miRNA 97 details

Id Micro97
SequenceCGCTATCCATCCTGAGTTCC 
Annotated namesath-miR390b-3p; 
Annotated pre-miRNANone

Targets of miRNA 97

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_107859; FTRINITY_DN86009_c0_g1_i1 107 126 GGAACTCAGGGTGAATGGTG BLAST psRNATarget
Ll_transcript_78347; FTRINITY_DN85751_c0_g1_i1 173 192 CAGACTTAGGATGGATAGCT BLAST psRNATarget
Ll_transcript_45453; FTRINITY_DN46265_c0_g1_i1 4 23 AAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_45168; FTRINITY_DN54182_c6_g1_i1 89 108 TAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_43886; FTRINITY_DN54151_c4_g1_i1 119 138 TAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_69892; FTRINITY_DN22825_c0_g2_i1 174 193 TGAACATAGGATTGATAGCG BLAST psRNATarget
Ll_transcript_162954; FTRINITY_DN53219_c1_g1_i3 133 152 TCAGTTCAGGATGGGTGGTG BLAST psRNATarget
Ll_transcript_38965; FTRINITY_DN58934_c0_g2_i19 2348 2367 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38947; FTRINITY_DN58934_c0_g2_i6 2271 2290 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38964; FTRINITY_DN58934_c0_g2_i18 2424 2443 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38946; FTRINITY_DN58934_c0_g2_i5 2271 2290 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38960; FTRINITY_DN58934_c0_g2_i15 2286 2305 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38943; FTRINITY_DN58934_c0_g2_i3 2363 2382 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38954; FTRINITY_DN58934_c0_g2_i11 2424 2443 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38949; FTRINITY_DN58934_c0_g2_i8 2304 2323 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38955; FTRINITY_DN58934_c0_g2_i12 2304 2323 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38942; FTRINITY_DN58934_c0_g2_i2 2304 2323 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38961; FTRINITY_DN58934_c0_g2_i16 2304 2323 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38963; FTRINITY_DN58934_c0_g2_i17 2304 2323 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38956; FTRINITY_DN58934_c0_g2_i13 2357 2376 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38958; FTRINITY_DN58934_c0_g2_i14 2357 2376 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38966; FTRINITY_DN58934_c0_g2_i20 2304 2323 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38948; FTRINITY_DN58934_c0_g2_i7 2304 2323 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38953; FTRINITY_DN58934_c0_g2_i10 2357 2376 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38940; FTRINITY_DN58934_c0_g2_i1 2357 2376 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_162952; FTRINITY_DN53219_c1_g1_i1 861 880 TCAGTTCAGGATGGGTGGTG BLAST psRNATarget
Ll_transcript_86389; FTRINITY_DN83436_c0_g1_i1 1090 1109 TGAGCTTATGATGGATAGCT BLAST psRNATarget
Ll_transcript_139751; FTRINITY_DN55273_c0_g1_i3 1502 1521 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139753; FTRINITY_DN55273_c0_g1_i5 1502 1521 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139757; FTRINITY_DN55273_c0_g1_i9 1502 1521 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139760; FTRINITY_DN55273_c0_g1_i11 1502 1521 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139749; FTRINITY_DN55273_c0_g1_i1 1502 1521 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139756; FTRINITY_DN55273_c0_g1_i8 1502 1521 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139754; FTRINITY_DN55273_c0_g1_i6 1502 1521 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_88398; FTRINITY_DN52456_c0_g1_i1 883 902 TGAACTCAAGATGCATGGCG BLAST psRNATarget
Ll_transcript_88400; FTRINITY_DN52456_c0_g1_i3 899 918 TGAACTCAAGATGCATGGCG BLAST psRNATarget
Ll_transcript_30363; FTRINITY_DN58497_c3_g2_i3 131 150 GGAAAGGAGGATGGATAGTG BLAST psRNATarget
Ll_transcript_30377; FTRINITY_DN58497_c3_g2_i6 131 150 GGAAAGGAGGATGGATAGTG BLAST psRNATarget
Ll_transcript_30367; FTRINITY_DN58497_c3_g2_i4 131 150 GGAAAGGAGGATGGATAGTG BLAST psRNATarget
Ll_transcript_30352; FTRINITY_DN58497_c3_g2_i1 131 150 GGAAAGGAGGATGGATAGTG BLAST psRNATarget
Ll_transcript_30360; FTRINITY_DN58497_c3_g2_i2 131 150 GGAAAGGAGGATGGATAGTG BLAST psRNATarget
Ll_transcript_334964; TRINITY_DN74460_c0_g1_i1 143 162 CAGACTTAGGATGGATAGCT BLAST psRNATarget
Ll_transcript_366924; TRINITY_DN46364_c1_g1_i2 115 134 TAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_282897; TRINITY_DN46151_c3_g5_i1 107 126 TAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_372697; TRINITY_DN47099_c1_g1_i23 1967 1986 GGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372666; TRINITY_DN47099_c1_g1_i1 1967 1986 GGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372690; TRINITY_DN47099_c1_g1_i17 2127 2146 GGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372681; TRINITY_DN47099_c1_g1_i11 2225 2244 GGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372673; TRINITY_DN47099_c1_g1_i6 2127 2146 GGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372701; TRINITY_DN47099_c1_g1_i27 2225 2244 GGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372695; TRINITY_DN47099_c1_g1_i21 2127 2146 GGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_505007; TRINITY_DN52579_c1_g2_i18 2472 2491 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504996; TRINITY_DN52579_c1_g2_i8 3793 3812 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_505003; TRINITY_DN52579_c1_g2_i14 3846 3865 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504988; TRINITY_DN52579_c1_g2_i1 3597 3616 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504997; TRINITY_DN52579_c1_g2_i9 3616 3635 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504999; TRINITY_DN52579_c1_g2_i11 3616 3635 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_505001; TRINITY_DN52579_c1_g2_i13 3669 3688 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504994; TRINITY_DN52579_c1_g2_i6 3669 3688 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504992; TRINITY_DN52579_c1_g2_i4 3793 3812 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504995; TRINITY_DN52579_c1_g2_i7 3784 3803 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_505004; TRINITY_DN52579_c1_g2_i15 3793 3812 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_505005; TRINITY_DN52579_c1_g2_i16 3846 3865 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504990; TRINITY_DN52579_c1_g2_i2 3837 3856 GGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_367856; TRINITY_DN48659_c2_g1_i9 1505 1524 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_441775; TRINITY_DN47827_c0_g1_i10 656 675 TCAGTTCAGGATGGGTGGTG BLAST psRNATarget
Ll_transcript_370539; TRINITY_DN52993_c0_g1_i1 1127 1146 TGAGCTTATGATGGATAGCT BLAST psRNATarget
Ll_transcript_367850; TRINITY_DN48659_c2_g1_i3 1505 1524 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_367848; TRINITY_DN48659_c2_g1_i1 1505 1524 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_367860; TRINITY_DN48659_c2_g1_i13 1505 1524 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_367855; TRINITY_DN48659_c2_g1_i8 1505 1524 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_367857; TRINITY_DN48659_c2_g1_i10 1505 1524 TGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_469600; TRINITY_DN45492_c0_g1_i2 472 491 TGAACTCAAGATGCATGGCG BLAST psRNATarget
Ll_transcript_329961; TRINITY_DN49049_c0_g4_i4 95 114 GGAAAGGAGGATGGATAGTG BLAST psRNATarget
Ll_transcript_329957; TRINITY_DN49049_c0_g4_i2 95 114 GGAAAGGAGGATGGATAGTG BLAST psRNATarget

Expression of miRNA 97


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)