miRNA 98 details

Id Micro98
SequenceCGCTATCCATCCTGAGTTCCA 
Annotated namesaly-miR390b-3p; 
Annotated pre-miRNANone

Targets of miRNA 98

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_107859; FTRINITY_DN86009_c0_g1_i1 106 126 TGGAACTCAGGGTGAATGGTG BLAST psRNATarget
Ll_transcript_78347; FTRINITY_DN85751_c0_g1_i1 172 192 GCAGACTTAGGATGGATAGCT BLAST psRNATarget
Ll_transcript_45453; FTRINITY_DN46265_c0_g1_i1 3 23 TAAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_45168; FTRINITY_DN54182_c6_g1_i1 88 108 TTAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_43886; FTRINITY_DN54151_c4_g1_i1 118 138 TTAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_69892; FTRINITY_DN22825_c0_g2_i1 173 193 ATGAACATAGGATTGATAGCG BLAST psRNATarget
Ll_transcript_38965; FTRINITY_DN58934_c0_g2_i19 2347 2367 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38947; FTRINITY_DN58934_c0_g2_i6 2270 2290 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38964; FTRINITY_DN58934_c0_g2_i18 2423 2443 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38946; FTRINITY_DN58934_c0_g2_i5 2270 2290 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38960; FTRINITY_DN58934_c0_g2_i15 2285 2305 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38943; FTRINITY_DN58934_c0_g2_i3 2362 2382 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38954; FTRINITY_DN58934_c0_g2_i11 2423 2443 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38949; FTRINITY_DN58934_c0_g2_i8 2303 2323 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38942; FTRINITY_DN58934_c0_g2_i2 2303 2323 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38955; FTRINITY_DN58934_c0_g2_i12 2303 2323 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38961; FTRINITY_DN58934_c0_g2_i16 2303 2323 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38963; FTRINITY_DN58934_c0_g2_i17 2303 2323 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38956; FTRINITY_DN58934_c0_g2_i13 2356 2376 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38958; FTRINITY_DN58934_c0_g2_i14 2356 2376 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38966; FTRINITY_DN58934_c0_g2_i20 2303 2323 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38948; FTRINITY_DN58934_c0_g2_i7 2303 2323 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38940; FTRINITY_DN58934_c0_g2_i1 2356 2376 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_38953; FTRINITY_DN58934_c0_g2_i10 2356 2376 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_162954; FTRINITY_DN53219_c1_g1_i3 132 152 TTCAGTTCAGGATGGGTGGTG BLAST psRNATarget
Ll_transcript_139751; FTRINITY_DN55273_c0_g1_i3 1501 1521 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139753; FTRINITY_DN55273_c0_g1_i5 1501 1521 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139757; FTRINITY_DN55273_c0_g1_i9 1501 1521 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139760; FTRINITY_DN55273_c0_g1_i11 1501 1521 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139749; FTRINITY_DN55273_c0_g1_i1 1501 1521 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139756; FTRINITY_DN55273_c0_g1_i8 1501 1521 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_139754; FTRINITY_DN55273_c0_g1_i6 1501 1521 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_162952; FTRINITY_DN53219_c1_g1_i1 860 880 TTCAGTTCAGGATGGGTGGTG BLAST psRNATarget
Ll_transcript_86389; FTRINITY_DN83436_c0_g1_i1 1089 1109 ATGAGCTTATGATGGATAGCT BLAST psRNATarget
Ll_transcript_88398; FTRINITY_DN52456_c0_g1_i1 882 902 ATGAACTCAAGATGCATGGCG BLAST psRNATarget
Ll_transcript_88400; FTRINITY_DN52456_c0_g1_i3 898 918 ATGAACTCAAGATGCATGGCG BLAST psRNATarget
Ll_transcript_334964; TRINITY_DN74460_c0_g1_i1 142 162 GCAGACTTAGGATGGATAGCT BLAST psRNATarget
Ll_transcript_366924; TRINITY_DN46364_c1_g1_i2 114 134 TTAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_282897; TRINITY_DN46151_c3_g5_i1 106 126 TTAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_372697; TRINITY_DN47099_c1_g1_i23 1966 1986 TGGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372666; TRINITY_DN47099_c1_g1_i1 1966 1986 TGGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372690; TRINITY_DN47099_c1_g1_i17 2126 2146 TGGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372681; TRINITY_DN47099_c1_g1_i11 2224 2244 TGGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372673; TRINITY_DN47099_c1_g1_i6 2126 2146 TGGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372701; TRINITY_DN47099_c1_g1_i27 2224 2244 TGGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_372695; TRINITY_DN47099_c1_g1_i21 2126 2146 TGGAACTTAGGGTGGATAACA BLAST psRNATarget
Ll_transcript_505007; TRINITY_DN52579_c1_g2_i18 2471 2491 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504996; TRINITY_DN52579_c1_g2_i8 3792 3812 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_505003; TRINITY_DN52579_c1_g2_i14 3845 3865 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504988; TRINITY_DN52579_c1_g2_i1 3596 3616 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504997; TRINITY_DN52579_c1_g2_i9 3615 3635 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504999; TRINITY_DN52579_c1_g2_i11 3615 3635 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_505001; TRINITY_DN52579_c1_g2_i13 3668 3688 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504994; TRINITY_DN52579_c1_g2_i6 3668 3688 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504992; TRINITY_DN52579_c1_g2_i4 3792 3812 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504995; TRINITY_DN52579_c1_g2_i7 3783 3803 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_505004; TRINITY_DN52579_c1_g2_i15 3792 3812 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_505005; TRINITY_DN52579_c1_g2_i16 3845 3865 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_504990; TRINITY_DN52579_c1_g2_i2 3836 3856 TGGAGGTCAGCATGGATGGCG BLAST psRNATarget
Ll_transcript_367856; TRINITY_DN48659_c2_g1_i9 1504 1524 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_367850; TRINITY_DN48659_c2_g1_i3 1504 1524 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_367848; TRINITY_DN48659_c2_g1_i1 1504 1524 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_367860; TRINITY_DN48659_c2_g1_i13 1504 1524 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_367855; TRINITY_DN48659_c2_g1_i8 1504 1524 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_367857; TRINITY_DN48659_c2_g1_i10 1504 1524 TTGAACTTATGATGGATAGTT BLAST psRNATarget
Ll_transcript_441775; TRINITY_DN47827_c0_g1_i10 655 675 TTCAGTTCAGGATGGGTGGTG BLAST psRNATarget
Ll_transcript_370539; TRINITY_DN52993_c0_g1_i1 1126 1146 ATGAGCTTATGATGGATAGCT BLAST psRNATarget
Ll_transcript_469600; TRINITY_DN45492_c0_g1_i2 471 491 ATGAACTCAAGATGCATGGCG BLAST psRNATarget
Ll_transcript_329961; TRINITY_DN49049_c0_g4_i4 94 114 GGGAAAGGAGGATGGATAGTG BLAST psRNATarget

Expression of miRNA 98


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)