| Id Trinity | FTRINITY_DN1146_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_179784 |
| Sequence | CTTACTTGCTAAGTCATCACTTTCTATATAAAGACAAAGCCTAAAAAACCATCATCCACACAAGAAAGAAAGAGTGATAAGACCAAAAAAGATGAAACCA GGAGACATGTTTGCATACCTAGGATCCATAATTGCTTCCTTCATGTTTTTTTGGGCTATGTTTGAGAGATATTTTCCATCCCAACTCATAAAACAATTTG AGAAATACTCTCAAAGATTAGTAACTCTAATCTACCCTTACATCCAAATCACATTCCATGAGTTCACAGGTGAAAGAATGATGAGAAGTGAAGCATTCTC AGCCATAGAAAATTACCTGAGTTCCAAGGCATCAACACAAGCAAAAAGACTCAAAGGTGACATAGCTAAGAACAACCAATCACTTGTTCTTAGCATGGAT GATCATGAAGAAGTAGCTGATGAGTTCAATGGAATCAAACTTTGGTGGGCTAGTGGAAAACATGTTATGAAATCACACTCAATTTCATTCAACCATATGA CAGATGAGAAGAGGTATTATAAGCTTACTTTCCATAAATATCATAGAGATGTGATTTTAGGGACATACTTGAATTATGTAATGAAAGAGGGTAATGATAT TAAGGTTAAGAATAGGCAAAGGAAGCTTTATACAAATAATGGTTCTTATTGGAGCCATGTAGTGTTTCAGCATCCAGCAACATTTCAAACACTAGCTATG GAACCAAAAGAGAAGGAATTAATCATTGATGATCTCATCACATTTAGCAAATCAGGTGATTTCTATGCCGGAATTGGAAGGGCTTGGAAAAGAGGGTATT TGCTATATGGTCCTCCGGGGACCGGAAAATCGACAATGATTGCTGCTATGGCAAATCTTTTAGGCTATGATTTGTATGATCTTGAACTGACTAATGTGAA GGATAACACTGAATTGAGGAAGCTGTTGATTGAGACATCTAGCAAATCTATAATTGTGATTGAAGATATAGATTGTTCACTTGATTTAACAGGCCAGAGA AGGAAGAAAAGGGAGAAGAGGGAAGAGGAAGAAGAGAAAGATCCAAGGCAAAAACAACAAGGAATGGAAGAAAGTGAAGGGAAGAATAGTAAGGTTACTC TTTCTGGTTTATTGAATTTCATTGATGGGTTATGGTCTGCTTGTGGTGGAGAAAGACTGATAGTTTTCACAACAAATTATGTTGAGAAATTGGATCCAGC ATTGGTTAGAAAAGGGAGAATGGATAAGCACATAGAGTTATCATATTGTGGATTTGAGGCATTCAAGTTGTTGGCTAAGAATTATCTTAAGATTGAATCA CACCATTTGTTTGGCACAATATGTGAATTGCTGAAGGAAACTAAAATCACACCAGCTGAAGTTGCTGAACATTTGATGCCCAAGACTTCTTCAGGGGATG CAGAACTTTATTTGAAGTCTTTGATTCAAGCACTTGAATTGGCAAAAGAAGAAGCCAATCTGAAATCTGAGGAAGTTGCAACAAAGAGTGATTAGTGAAC CATCCCTCAATCAATAATGACTTTAAATTTTGTGAGTTTTGGTGACTTTAACAAATTTGAGCATTTGGATGAAGATTTTGGACTGCTTAGATAAAAATTA GATTCATATTTGCTAGAGATGCCAGAATCACCTTTTTCAAAGTCATTGAGTCCAATCTCTGAGTTAATGAAATGGGTTAGTGGAAGGGAATGAATAAGAC AAGCACATTATGTACTCATTCTATGTAACCTTAGAAAATTATATATGTACCTGAACCTCAACAAAATCTAGAAAATTAATGGATGCACTGTCTCCTTAGC AGAGTGCACTAAAACATGAATTAATGGTGGAAAATTGCAGAAAAAAGGATGAGAGGAAGGTTGAAAAACAGAAATGAAAACAGACATGTAATATTTTAAA TGGATATATGTCATATTTTGATAACAGCTTACACAACTTCAGATATAAATTTGATTTATTAATAAAACAAGAATACATGATTTATAAGAAAAAATATGAA GTGCATAGAGATACTCCTGTTTGTCACAATATAACTGTGGATACCAATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_347; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_179784
| Blastp | AAA-ATPase ASD, mitochondrial from Arabidopsis with 60.57% of identity |
|---|---|
| Blastx | AAA-ATPase ASD, mitochondrial from Arabidopsis with 60.57% of identity |
| Eggnog | Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465) |
| Kegg | Link to kegg annotations (AT5G40010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442623.1) |
| Pfam | Domain associated at C-terminal with AAA (PF14363.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |