| Id Trinity | FTRINITY_DN11966_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_70471 |
| Sequence | AAAGGTAACCGAGGTTTGCCAGGTTTTCCATCAAACGGAAATCCTGATAAAGGAGACCAGGGTGACCAAGGAATGCGGGGATTACAAGGTAATAAAGGAG AACGTGGAAATCAAGGTTATCAAGGTCCATATGGTTTTAAAGGAGAACAAGGCGATTTTGGATTTAAAGGATTTTCTGGACAACCGGGTTTTCCTGGTTT AAAAGGAATAAGAGGAGACATCGGTTTACCCGGACTTGACGGACTTCCTGGTCAAAATCCAGAACCAGGAGAAGAAGGTACACCTGGTTTTCCTGGAGAG AGTGGAATACCTGGAAGACGAGGTCAAAAGGGTGCTGTTGGTGAATTTGGACCAACCGGAGAGGACGGCCAACCTGGTTCGCCGGGTATAAGTTTACAAG GAAGAAAAGGAGAACAAGGAGACAACGGTTATAGGGGTCGCCCAGGTTTAGCAGGACTGCAAGGCCTATCCGGTTTGGATGGAAGATCTGGTGCGCCTGG CCGAAAAGGTCAACCCGGCGACTATGGCCATGGTGCTGATAGCTTGAAAGGAAAACAGGGAGACATTGGTTTTAGAGGTCAAGACGGATTTATGGGAATA AAAGGAGAACGCGGAGAACCTGGTTTAGATGGTTTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_452; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_70471
| Blastp | Collagen alpha-1(IV) chain from Mus with 45.58% of identity |
|---|---|
| Blastx | Collagen alpha-1(IV) chain from Mus with 41.81% of identity |
| Eggnog | collagen, type(ENOG410XNMM) |
| Kegg | Link to kegg annotations (12826) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014507944.1) |
| Pfam | Collagen triple helix repeat (20 copies) (PF01391.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |