Id Trinity | FTRINITY_DN1268_c0_g1_i1 |
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Name Transcript | Ll_transcript_239348 |
Sequence | TATTAAGTGTCTAGTTTAGATATGGAAATTCCTGTGATAGATTTCAGCAACCTTAATGGTGATAAGAGAGGTGATACCATGGCACTATTGCATGAAGCTT GTGAAAAATGGGGTTTTTTTGTGATTGAGAACCATGACATAGATATTGAGTTGATGGAGAAAGTGAAGCAGTTGATTAATACATACTATGAGGAAAATCT GAAGGAAATGTTCTACCAATCTGAAATAGTGAAGAGGTTGGAGAAACAGCAAAACATGTCTGATATAGATTGGGAAAGTGCTTTCTTCATTTGGCATCAT CCTACTTCTAACATTAATCAAATTCCTAATCTCTCTAAGGACCTATGCCAAACAATGGATAAGTACATTGCACAACTCATTCAGCTAGCAGAGAAACTAT CACAACTCATGAGTGAAAACCTAGGTTTGGACAAGAATCACATAAAGCAAGTATTTTCAGGAAGTAACAAGGGTCCAGCAGTGGGAACAAAAGTGGCTAA GTACCCTCAATGTCCACACCTAGACCTAGTTAGAGGGCTTAGAGAACACACTGATGCTGGTGGTATCATCTTGCTTCTCCAAGATGACCAAGTTCCTGGC TTACAATTCTTCAAAGATGGTAAATGGGTTGAGATTCCACCCTCAAAGAACAATGCTATTTTTGTCAATATTGGTGATCAAGTTGAAGTTATGAGCAATG GTTTATATAAGAGTATTGTGCATAGGGTCATGCCTGATAAGAATGGAAGTAGAATCTCTATTGCTACTTTCTATAATCCAAATGATGATGCTATTATTTC ACCAGCTCCTAGGCTTTTGTACCCAACCAATTTCAGCTTTGGAGATTATTTGAAGCTTTATGGAAACACTAAGTTTGGTGAAAAGGGTCCAAGATTTGAA TCCATGAAGAATATTATGACCAAAAATGGGCATTGAAAACATGTTATTATAGTTTTATATACTATTGCATGCATTACATTACATTACCTTGTCTAGTTAA TTTTACATGTCATATTTTCACATCTTTATGGCTCTATCCCCCAAATATTATAGCCTCTTTGTTGTGGATTTGGAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_597; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_239348
Blastp | 1-aminocyclopropane-1-carboxylate oxidase 1 from Arabidopsis with 69.8% of identity |
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Blastx | 1-aminocyclopropane-1-carboxylate oxidase 1 from Arabidopsis with 68.65% of identity |
Eggnog | 2OGFe(II) oxygenase(COG3491) |
Kegg | Link to kegg annotations (AT2G19590) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424364.1) |
Pfam | non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |