Id Trinity | FTRINITY_DN13266_c0_g1_i1 |
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Name Transcript | Ll_transcript_243598 |
Sequence | TGACGATCTTTGGCCACCTTTCTTCCGTGCTTTTCTGTTGATGTTCCGGCAATTGTTCCCAAGTGCAGCTTTACCAAAACTATGAGTGATCACTTGCCGC GCCCTCTGAGGCTTGATAGGTTGCTTATTCAGGTCCACAATCTTTGGAAGAAGACCACTAACTACTTTCCGTAGCTGGTTATCACCGATGTTTCTTTGAA TTGGATTTCCAATCAGGTTAAGAACCTGAAGTGAGTTGTAGTTAGCCACAAGCTGGCCTATTGCTTTTGTTGTTGTGATTTTGTTAAACCTTAAATCCAG AACTGTTAGCTTTAATAGCCTGTGTAGCCCCTCAACATCACTTATCCTGTTCCCAGAAATATATAGCTCTTTGATAAGTGTACAATTTGACAACCCTGAT AAAAGACATAACAATAATTGTATTATAGAAAATACTTCATGAAGGGTAAGAAATTTGAGAAGTAAAAC BLAST |
Tissue | flowers |
Gene name | LI_gene_699; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_243598
Blastp | Leucine-rich repeat-containing protein 46 from Rattus with 41.67% of identity |
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Blastx | Leucine-rich repeat-containing protein 46 from Rattus with 45.24% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (287653) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_004500636.1) |
Pfam | Leucine Rich repeat (PF13516.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |