| Id Trinity | FTRINITY_DN15076_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_59133 |
| Sequence | CTGGTTCTGTGGGACCAGTTGGTTTCCCCGGTTCACCAGGTGATGTTGGAGCGATTGGACCACCAGGTTTCCCTGGACCTCCAGGATCAGATGGATTTCC GGGTATACCAGGAAAAGATGGCCCGCCAGGATTAATGGGATTCAAAGGAGAACCAGGAAACCCTGCACCTTATGGTGAAAAAGGAGATAAGGGTGATGTA GGTTTTTCAGGGGAACCAGGTTATCCTGGATCTAAAGGTGATAAAGGAGAAAGAGGTTATCCAGGGCTTGAAGGAATGCAAGGTGTACAAGGTTTACCAG GTGACAGAGGAATGACTGGAATTCCAGGAAAATTAGGTATGCCTGGAATCTCTGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_1078; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_59133
| Blastp | Collagen alpha-1(IV) chain from Sophophora with 52.21% of identity |
|---|---|
| Blastx | Collagen alpha-1(XXVII) chain B from Danio with 61.84% of identity |
| Eggnog | collagen, type(ENOG410XNMM) |
| Kegg | Link to kegg annotations (Dmel_CG4145) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014507944.1) |
| Pfam | Collagen triple helix repeat (20 copies) (PF01391.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |