Id Trinity | FTRINITY_DN15167_c0_g1_i1 |
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Name Transcript | Ll_transcript_66646 |
Sequence | ATGACGTGGCAGAGTTTGTTCAGGTCGCATGAAACGGGTATGGGAAAGTCTCGGGTTCGAGTTGTGCAGATGGAAGTGGTGCATGGTGTGGGGGTGTACG AAGAAGAGAGCAGTGGGTTGAAAATGGAGTTGAGGTTATTGTTGTTTTTGCAGTGTAGCCAGGAGAGTTCACTCCCTGTGTCGAGGACCATGGTAACGTT CTGTGGGGGCGTGCCAACTGTTAACGAAATTGTTAAGGTAACGTTGTGATGGAAAGTTAACTTACGTGAAGAGGGTAGTGGTAGTGTTTGTACTTTTAGA GGCAATATAAGAAGGTCTTGTGTTTGTATTTGTTTTGAAGAGACAGAAGAAACATTTGTTTGAATTATTATTTGAAGGAGGATGAAGAAAAGGGAAGTTG CAAGAGAAGGGAGAAGAAGGAAGGGTACATTGAGAGAAGACTCAGAAGAAGCCATGATTGAAGAATATTGATTGAAAGGGGTCTTTGTTAGTTGAGTTGG AACTTCAAATAGAAATTAAAAGAAGTGAGAGAAAGAGGGTTTATTTTGATTGTACTATGAGTACTACTCAGTGTTTTGGTGCCCTCTCAACATTAATGCT CTTTTCATATATAGCTGAATTTGAATGAGAATCCATGTCGTGGCATTCTGTTAGGTAGCCATCTTCAAAACATTATTA BLAST |
Tissue | flowers |
Gene name | LI_gene_1124; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_66646
Blastp | Aspartic proteinase PCS1 from Arabidopsis with 59.81% of identity |
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Blastx | Aspartic proteinase PCS1 from Arabidopsis with 54.21% of identity |
Eggnog | aspartic(ENOG410XNV7) |
Kegg | Link to kegg annotations (AT5G02190) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461846.1) |
Pfam | Xylanase inhibitor N-terminal (PF14543.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |