Id Trinity | FTRINITY_DN15189_c0_g1_i1 |
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Name Transcript | Ll_transcript_66666 |
Sequence | CTTTTTCTAACCATTGCTTTTCATTTCCTTCACAACTCTATTCTCTTCTATTCATTCTCTCTATCATCATATCTCTTATATAGATAGAAAAGAAGAACAA AACCATAGAAATTCACTCATATTTTTTTCCTCAAATCTAAATATAAACCATGGCTGGTCTTCAAAGATCTGCAGTTTCTTTCAGAAGACAAGGTTCATCT GGGTTTGTTTGGGATGATAAATTCTTAACAGAAGAATTTAACAAAGTGAATCAACAAAACGAAGAACAACAACATGAACAAGGTGAGATTAAAGCACATG CAACAACTTCACTTGGATCAGTTAATACAACTATGGAGAGAAGCCGCTCCACCGGTGGCAGCAGCCGTGGATACCGGACCGGAAAAGTGTCTCCGGCGAT AGATCCGCCGTCTCCGAAGCTCTCTGCATGTGGCTTCTGTAGTGCTTTTGGAAAACATGGGGACAAGGGTAGTCAACGGTCAAGGCCTGGTAAGCGTAGA ATTAGGTAGTTTGTTTAGTGAATTATGGTTGTGGTTTTTCTTCGGCGGCCGGAAGCGGTGGTTTCCGGTATCGGAGAGGGGATAGTACGGTGGGTGATAG AATAATAGGGTGAGTTGGATTCTTATGTTCTGATTGGGAGTGAAGTTTCGGAAGAGAATGAACAAAAAAATAGAAATAATCTCGATGTTTCATTTGTCAA GTCTTTCAATTTTCTTCGTTATCTTCCAAAACCTAACTCGCAAATGGCATTCTCTTTTCTGTCTCTCAATTTTCAGGTTTTTGTTTTTTAATTATTTAAG ATGGAAGAAGACGTAGTTTTATTGTAATTATGTGTGTAGATTTGTTGGATTTTTGGGAATTTTTATTTTGATCTTTGTACAATAATTTTAGATAATTTTG AGATGGTAACTGATTTTGATGATTGTGGGCTCTCTATGTATGTCGTATTTTTTTGGTATTATTAAGGATATCGTTTCAAATTCATATTTTTGAATAAGGA GCTATTGACTTTAGAATCCAATAGGGAATGTTACACCACTTGACCAACGTCTTTTTGATTGAAGTAAACAAAATATAGGTAAAGTCATGTTAAATGTACT TAAGATTTTCTCCAAAGTCCAATATTAGATGAGACTTATTATTTAG BLAST |
Tissue | flowers |
Gene name | LI_gene_1132; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_66666
Blastp | MAPK kinase substrate protein At1g80180 from Arabidopsis with 48.55% of identity |
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Blastx | MAPK kinase substrate protein At1g80180 from Arabidopsis with 42.75% of identity |
Eggnog | NA(ENOG410ZGQ8) |
Kegg | Link to kegg annotations (AT1G80180) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443387.1) |
Pfam | Domain of unknown function (DUF4666) (PF15697.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |