Ll_transcript_98107

• Id Trinity: FTRINITY_DN15942_c0_g1_i1
• Name Transcript: Ll_transcript_98107
• Sequence: ATTTTTTTCTGTTTTGTTTTAATATCATTGGCCCGAGATATATTTTTATTTGGGACATCTGATATTTGTCCATTGAAAACAGACAAAAATATGCCTATAA TACTCACGTTACCATCCAATTACCATCCAATCAAGGCATCGTCTATGGTCAGAAAGATGCTATACATTTTCCTTTTCTATCTTATCATTGTAGAATTTCT TTGCATAAACATTCGTTTCCTTAACACTTCTGCTTTTTACTCTGTTTGCTAAATGGATTTTCACAGTAGAAAACTGCTGCATCAGCATCATTACCATGCT TCCACCATGGCTGCTAGTCCAACACCTTCTCCTTCCCCTCTTGAATCACTGCCACAGAAACCGGAAGCATGGCTTCCTGTCTCCGATTTCATCGGCGGGG AAGATATAACAAACCATAACCATGTTCATTTACTTCAAGTAGCTTTGATTGTTATGGCTTGCATGGTTGGCATGTTTATGTCTCTTTGCAGCATGTCCTT AATCTTAAAGCACTATTACTCAAGAAGACTCAATCATAACAACAACAGAACAAGAAACTCGCCTATATTGTTCCATGTGAATGGAAACTCAGGTGTTGTT TCAGATAATGATGAGGGACCAATGGTTGAGCACCCTATATGGTTTATCCGCACAGAGGGTCTTCAACAATCACTGATAGATTCCATCACGGTTTTCAAAT ATGTAAAAGAAGAAGGGCTAATAGATGGGACACTGTGTTCTGTTTGCCTCGGCGAGTTTGAACAACAAGAGAGTCTAAGACTCTTGCCTAAGTGCAGCCA CGCATTTCATATTCCTTGCATTGATACTTGGTTAAGATCACATAAGAATTGCCCCTTGTGTCGCGCCCCTGTGGTTCATGACGCTGGTGCTAATGGTAGT GGCACTGCTGTGAGTGCCACTGAGACAGATACAAGCACTTTAGGTCAGAATCATGTGGAGAACATGAGTGGTACTAATGAGGAAGAAATGGGAACTAGTC ATGTAGTAGAAAGTGAGAGTAGCACATTGAGGATTGAAAATGATGACTCAGAAGGAGGAGATATTGAAATTCCAGATAAGATGGTGTCTAATTCTGACAA GATAAATTTCCATGCTTTAGAAGTGGAAATACAACACATGATGAGGTCAATGTCCATGGATTCTTCTTCTGTTCCTTTGGTATTTACTGATGTGGTGGGT TTAAATTGTGATGCAGAAGGCTCAGCCACAAGCTTACATGGCAAAATCAATTCAGGTAACAAGGATATGCTTATTGCTAAGCAGGGTAGTGGCAGTGGAA GTTCAACTATTTACAAACAGGCTTCAATTCGGCATGCATTTCAGAAAAAGCCTATTTCATTGAGAGGGTCTTTTTCACATAACACAAAATTGTTATTTTC TAGACATTGTAGGAGCCAGAGCTCAACCCTTCCCTTGTAAACTATAAGTACTAGGGAAATATACCAACAAAATCTTCAGGTCCTAGCATGGCAGGGTCAA GTTAAAAAATTTAAGAGGACAATTGGGTAGGAGTATGGTAGTTTATCCAAATCAGTAAACTATATATTTCTGCCTTTCAAAACAGACAGCAATAATATGG TTAGTATAGTTTCTGCAACAATATGGTATTATGGTTATATCATCCTATGTTTTTAAACATTAAGAGTAATAAACATTATATTCTACTGATAGTCAATGTC ATTAAAATACAGCTTACTTTAAGTAAGGAAAGAGTTGAACCACAAATATATAGGAACAGACCAATTCAATTATCAGTTGACAGCATGCGAGGATTTACAC AAAAATAGAAACTGAATCAATCAAGGAGTTGGCAGGAGATAAAAGATTCAAATAAAGATTTATCTTCTCTTGTATTTTATATATTTGTAATCTTATCTTT ATTTTGTAATGTTTCACCTTTGTACTCCTCAGTTATAGGATTGTTGTGGTCTATATAAACTTATAAAAGAAACATTGTCTGAACCCCCTAGTTCAATATT AATATGGTGTTTCCTGATAAATCTAT
• Tissue: flowers
• Gene name: LI_gene_1401;
• Additional information: details;

Expression of Ll_transcript_98107

FPKM

• FPAB: 14.5
• FPNAB: 13
• LF1: 1.7
• LF2: 1.3
• LF3: 1.8
• LF4: 3.2
• UF1: 1
• UF2: 1.1
• UF3: 2.1
• UF4: 2.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_98107

• Blastp: RING-H2 finger protein ATL54 from Arabidopsis with 37.39% of identity
• Blastx: RING-H2 finger protein ATL54 from Arabidopsis with 47.56% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT1G72220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462623.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;