Ll_transcript_176326

• Id Trinity: FTRINITY_DN17716_c0_g1_i1
• Name Transcript: Ll_transcript_176326
• Sequence: CAAAATTAAAACACTAGAGAAGCCCTTCCACCTTTCTTCTTGAACAGATCTAAACCCCACCACCGTGCTGTCGCGGCCGGTCCCTCTCCGAATCCGCTTC TCTGTTCCTATGAATGAAATAACACGCTTTCATAAAATAAGCACTAGACATAGGCTTTGAATTTTGCATTAATATATTTCTTGATTAAATTTGATTTTGC ACTGAACCATAAACCCATTTTCATTGCCTCACACCAAAACCTTCACCATCCATTTAATCTTATTTCACAACTTCATAATCCGATGTCCCTTTTTGCAAAG ATTCGTTTTTTCTCATGCTTACACACTTTCAAAACCCTACCCCTCTTCTCTCAACAAATGGGTATGGCTTCTATTGCCGATACCCTTTATACCAATCTGC ATAAAAACAACAATGGAAATGTTGAATCTTTCCTCTCCAAGCTTAAACCCAAATTGGATTCTCAATCTGTTATTCGAGTCCTGAGTAGGTGTTCTAATAA GGAATCTGAATTGGGTGTTAGGTTTTTCATTTGGGCTGGATTTCAACCTGGGTATAGACATAGTGCCTTCATGTATAGGAAAGCATGCAACTTGCTCGGG GTTATTCAAAATCCGAAGATTATTTGCAATGTGATTGAGTCTTATGAGGCTGAAGGGTGTTTAGTCACTGCCAACATGTTTAGAGAGGTTCTGAAAATTT GTAAAGAAGCTGAGCTCGCTGACGTGGCTTTGTGGTTGTTGAGGAGAATGGAGGATTTTCACTTGCAACCCGATACTGTGATGTATAATGTGGTTATAAG GTTGTGTTGCAAGAAGGGTGAGATTGAAATGGCTGAAAAGTTGGTCGAAGATATGGGCCTAGATGGTCTCTTTCCCGATATGATTACATATATGACATTG ATTGAGGAATTATGTAATGTGGGTCGAACGGAGAATGCTTACACTCTGCTTAAGGCTATGAGAGTGCATGGTTGTACGCCCAATACGGTGGCTTTCTCAG CTGTTTTAGATGGTTTTTGCAGGTCTGGATCCATGGAAAGGGCTTTAGAGTTATTGGATGAAATGGAAAAAGAAGGCGGGAATTGTAGTCCAAATGTTGT TACTTATACATCTGTGATTCAAAGTTTTTGTAAGAGAGGCCAGTGGATAGAAGCATCTGATATTCTGGACAGAATGAAAGCTTTTGGGTGCCAAGCAAAC CATGTTACAGTTTTTACTTTGATTGAAAGCCTTTGCGATGAGGGTCTCGTGGAAGAAGCTTATCGGTTGGTTAATAAGTTTGTGGTGGAACATGGTGTTT CATATGGAGATTGCTGCAGTTCACTTGTGATTGCATTGATAAGGATAAAAAGAGTTGAGGAGGCAGAGAAGCTCTTCAGGGAAATGCTTGCTGGTGAGGT CAAACCTGCTGCTTTGTCATGTAGCCTTATGTTGAAGGAGCTCTGTATGAAGGACCGATTCCTCGACGGATTCTACTTGCTTGATGCAATAGAGAAAATG GGATACTTGTCTTCCATTAACTCTGATATATATTCTACTCTTTTGGTTGGTCTTTGTCAAAGAAGCCACTTGATGGAGTCCACAAAGCTGGCAAGGATAA TGCTCAAGAAATCAGTTCCTTTAAGAGCTCCATACCAAGATAGTGATATTGGTTTTCTATGTAAACATGGAGAAAAGGACCTTGTGAACCAATTGACTGG TAAATTCAAGGGACTTTGATGATGAGGATTTGTTTCTATCATGTAGGTTGATAAGCTATGTTCTTATTGTTCCTTGAAGGTGACTGGGTAATTTTGTTTT GCCTTTCGAGAACTATATGCTCACATCTGTCTCTTTTGCTCGGTCTATTCTTTGTGTTCGAAACATTAGATGCTAGTTATTTTTTATAACTTCTTAAACT GTCTTCCTTATACAATTTGATGTCCCTGAAATTGCAGCGCTTTGATGTAATGAAGATTATAAGTCAAGAATAAAATGGTTGAATCACAAGTTTTTCCTCT GCCTTTTATCACTTGTGTTTAAGAATGACTGATACCATGCTGCACTCATGATTTCATTTAGTTATCTTTTAGCATTTGAATCTGATAGTTCAACTGGCTA TTGAAGTTTTT
• Tissue: flowers
• Gene name: LI_gene_1819;
• Additional information: details;

Expression of Ll_transcript_176326

FPKM

• FPAB: 1.6
• FPNAB: 3.1
• LF1: 3.3
• LF2: 2.9
• LF3: 2.6
• LF4: 2.2
• UF1: 3.3
• UF2: 3.1
• UF3: 2.3
• UF4: 2.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_176326

• Blastp: Pentatricopeptide repeat-containing protein At5g47360 from Arabidopsis with 45.29% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g47360 from Arabidopsis with 43.83% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G47360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421173.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;