Id Trinity | FTRINITY_DN20205_c0_g1_i1 |
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Name Transcript | Ll_transcript_140234 |
Sequence | CTCTAATCTCTATCTTTCTCTGCACAATCACAATCATCAAATTTAAGCGATTATTCACAATCATCAAATATAAGCGATTATTCACAATCACTATGAAATT CAAAGCTTTTCTCACCGATAACGGAGTAAACCTCTTGGAAAAGCGATTCCTCCCAGCCTTAGACAAAATCGGAAAAACCTGCCATCTCTACCTCACTCGC GACAACGCAATCTTCCTCCACAACCTTCTCAACGGCGACGGTGTTCAATCCGTCGCTCAGTTTCGCATCCAAGCACTCTTCGACGATTACCGCATCTCTA GTCAAAACGACGATCGTATCGCTTTCACCATTGACGTTTCTCTTCTCCTTCGCGCTCTTCGTAGCACTGTCAGCATTTCTTCTGAATATGGCGCTGACGT GGCGGCGCCGGATTCCGATTCTAGTAACCGGCTTCAGATTAAGCTGGTTAAGAAGTTGCCGCCGAATTGTACGGTTGCGATGCCGTTTCTGACGGTTGAA ACTAGGGGTTATAAATCGGCGGTTATTCAGGATATTCCGATTTCGAAGCCGTTGTCTAGGGCTCAGGTTGTTGAGCTTCAGAATGCTCTTGAGATGGCAC AAGATCTGCCTCAAACACTTGTTCAGGTGCCAGATTTGATTCAACTGCAAAACTTTGTGGATCGGATGAAGAATGTGGGTGATGTGCTGAATGTGTTCAT AAGTAAGTATGGTGATTTGCGTGTTGATGTTTCAACAACACTGATCAGTCTAGGCGCCGAGTTCCGGAAATTGTTGGTGATTGGAGAGCAAGCAAATGAG CCTGCTGAAGATCAAAACCTCAGTGCTCGATCGCGGTCGTCAAAGTCGATTTCGAGAGGGGATGGGCAGACTGTGCAAGTGAGTGTGAAGCACTTTTCCA AGAGTCTGCAGTGTCACTTGTCCAAACCAGATTGTGCTTTCTATGGGATTGCTCCACAGGGAAGTTGTTTGACAATGATATTTCAGTTCTTCATTCCGGG TTCTCGCCAGAGTGATAAATCAATCAGTTTGCATTGCAGGCTTCCTGTTCTTGACCCTGGTTCGAGTTAAACTCAAACACTCTTGTTATGATTGTGATTT GTCTTTGATTGTTCTAGACCCTTTTATCTGTTAAAATCTTGCTGCTCACTTAGAAACTAGCTCTGTATTTCATCTCTGAATGTGTTACTGTCTATAACAT ATATTGAGTTCTGTTACAAAATTATCAACTTCATAACTATCCATAACAATTGATATGAA BLAST |
Tissue | flowers |
Gene name | LI_gene_2388; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_140234
Blastp | Checkpoint protein hus1 homolog from Dictyostelium with 26.22% of identity |
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Blastx | Checkpoint protein hus1 homolog from Dictyostelium with 26.04% of identity |
Eggnog | Checkpoint protein(ENOG410ZQ9J) |
Kegg | Link to kegg annotations (DDB_G0285353) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442697.1) |
Pfam | Hus1-like protein (PF04005.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |