Ll_transcript_33003

• Id Trinity: FTRINITY_DN22357_c0_g1_i1
• Name Transcript: Ll_transcript_33003
• Sequence: TATGCACTATGAGGCCCTCTTATACTCTGCATTTATACAATCTATAGCTCCAAAACAATTTTAATTTTCAAATACCCATTGCTCAATTTTCATGTCAGAC TTTTAGTTTTTGTGCAACATAAATTATCATGGTTACTCACTATTCAGTAATACCATAGTATTTAAAGTTGAAATTGCATGCTACTTTTAAGCATTGCAGT AACTTCCTTCTGCTAACAATAACAAGAGGGTTCTGTAACGCAGACATGTTATGTAAAACAGTTACTCATAGTTTTACACCATGCCAACTCAAAGAAACTT GCTTAAAGCTTCTTTCTTTCTGCAACTCACACTCTCTCAGAGAGGGACTATGTGTTCACACCCCAATTATCAAAATGGGTATTCAAGATGACTTGTATTT GAACAACAATTTGTTATCATTGTATGCTAAATGCTTTGGAGTTGTAACTGCACGCCATTTATTTGATGAAATGCCTTACAAAGATGTTGTGTCTTGGACT ACAGTCCTGTCTGCTCATACCAGGAACAAGCATCATTATGAGGCCCTTGAATTGTTTGACATGATGCTAAGTTCAGGTCAACGCCCCAACGAGTTCACTT TGTCCAGTACCTTAAGATCGTGTTCTGCTTTGGGAGAGTTTGAGTGTGGGGTGAAAATTCATGCCTCTGTGGTCAAGCTTGGATTGGACCCGAATCCGGT TCTCCGTACTAATTTAATCGATGTATATACCAAGTGTGATTGTACTGTTGAAGCGTATAAGTTGCTTGCATTTGTGGATGATGGTGATATTGTGTCTTGG ACAACAATGATCTCTTCCTTAGTTGAGACTAGGAAATGGATTGAAGCTCTACAAATCTATGTGAAAATGATTGAAGCTGGAGTTCACCCAAATGAGTTCA CATTTGTTAAACTCTTAGGCATGTCTTCTTTTCTTGGTTTGGGTTATGGAAAACTACTGCATGCACAGTTGATAAGATATGGTATTGAATTGAATGTGGT CTTGAAGACGGCCATTGTTGATATGTATTCAAAATACAGACAGATGGAAAATGCTATTAAGGTCTCAAATCTGACACCTGAGTATGATGTGTTCTTATGG ACCACCATTATCACTGGACTCTCTCAAAATTTGCTTGTTAGAGAGGCTGTCCATGCATTTATTGATATGGAATTGTCCGGAATCGTACCAAATAATTTTA CATATGCCAGTTTGTTGAATGCTTGCTCCTCAGTTTTATCACTGAACCTAGGCGAACAGTTTCATTCTCGGGTTATCATGGTTGGACTGGAGGGTGATAT CTTTGTTGGAAATGCTCTGATTGATATGTACATGAAATGCTCCCAAGTCACAACAAATGCTGCGAAAGTTTTTAGAGGGATAGCCTTACCAAATATCATC ACTTGGACTTCTTTGATTGCTGGTTTTTCAGAACATGGTTTCGAAGAAGTATCTTTTCAGTTGTTTGCTGAGATGCAAGCAGCAGGAGTGCAGCCAAATT CCTTTACACTGTCTACTATCCTTGGAGCTTGCAGTAAAATGAACTCTATCTCTCAAACAATGAAACACCATGCATATATCATAAAAACAAAAGCAGATGA TGATACGGTTGTAGCAAATGCTCTTGTAGATGCTTATGCTGGAGGAGGGATGGCAGATGAAGCATGGCATGTTATTGGCATGATGGATTATAGAGACCCT ATCACATACACAATTTTAGCATCAAGATTAAACCAGAGAGGGGATCATGAAATGGCATTACAAGTCATCACACACATGTGTGATGACGGGGTTAAGATGG ATGAATTTAGTCTGGCAAGCTTTTTATCTGCTGCAGCTGGCTTAGGCACTATGGAAACTGGGAAGCAGCTACATTGTTATTGTGTCAAATCAGGTTTCAA CGAATGCAACTCAGTTTCGAATAGCTTAGTTCACTTGTACAGCAAGTGTGGTAGTATGAAGGATGCATACAGAGCTTTCAAAGATATAAATGAGCCAGAT GCAGTGTCATGGAATGGTTTCATATCTGGATTGGCATCAAATGGATATATATCATATGCCCTTTCTGCGTTTGACGACATGAGGCTAGCAGGAGTTAAAC CTGATTCTGTTACATTCTTGACACTAATTTTTGCTTGCAGCCATGGTGGTTTGTTTGACCTTGGTCTTGATTATTTCCATTCTATGGAAAAAACATATAA TGTGGTACCAAAGTTGGATCACTATGCATGTTTAGTTGATCTTCTTGGTAGGGCTCGTCGCTTAGAGGAAGCTACGAGAGTCGTTGAAACAATGCCTTTC AGACCAGGCTCTCTAGTCTATAAAACTTTATTAAATGCTTGCAAGTTACATGGAAATGTACCCCTGGGAGAAGATATGGCAAGGAGATGTCTTGAGCTAG ATCCATCCGATCCTGCAATATATTTGCTGCTGGCAAACTTGTACGACAACGCCGGACTCTCTGAATTTGGCGAGAAGACTCGCAGGCTGATGAGAGAAAG GGGTTTAAGAAGAAATCCTGGAAAGTGCTGGATGGAGGTAAGAAGCAACATTCATCTCTTCTCTACTGGGCAGACATCACACCCCATGATAGATGAGATT AATGAAAAACTGGAGCTTCTTATAACCAAACTTAAGAATCAAGGGTACGGATACGAAGAGAGTCGTGATAAGTTATACCACTCAGAGCAATTAGCTGTTG CATTTGGTCTTCTTAGTGTACCAACTATGGCTCCAATACACATAAACAAGAATTCACTTATCTGCTTACACTGCCATGACTTCATAATGCTTGTGACACA AGTGGTTGGAAGGGAGATAATTGTGAGGGATGGAAAAAGATTCCATGTCTTTAACAATGGCCAATGTTCATGCAGAGGTGGATAATGTGCAACAATGGGG AGAAACATTTGATTGCTTGTGCCAAAATGGATTTTTCAAAGAATGGAGCTTATGGCTAACATCACACATAAAAACTAATTATGATTCACATTAAGTCATT AACTGATTTGAATTTTTTTTTGGGTGGTGGTGGTGGCCATTGTTGCTGCAAATTTAGAGCTTTTTTATCAATATGTTCCAATGTTGACAAATTTAAGGGA GTACATCACAATTATTCAAATGTTGAAAAATCAAGAATAGTGCACCAAAGATGAATGTTCTTGACAATTTTAAAAGCAAAAATAGTTGTTTTATTGTTGT TTCTTTCTGTTTTTTAT
• Tissue: flowers
• Gene name: LI_gene_3323;
• Additional information: details;

Expression of Ll_transcript_33003

FPKM

• FPAB: 0.2
• FPNAB: 0.3
• LF1: 0.3
• LF2: 0.2
• LF3: 0.2
• LF4: 0.3
• UF1: 0.2
• UF2: 0.2
• UF3: 0.1
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_33003

• Blastp: Pentatricopeptide repeat-containing protein At5g52850, chloroplastic from Arabidopsis with 49.94% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g52850, chloroplastic from Arabidopsis with 49.94% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G52850)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442105.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;