| Id Trinity | FTRINITY_DN22623_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_239864 |
| Sequence | GAGCATTGATATGCATCGAAATTCCTCTGAGAAATCTACAGAGAACCTTGAATGCTATTCCTCATACAACAAATATGCGAACCTTGAAATGCATTAATTT GTCTTTCCTTTGCTTCTAATTCATAACATATTCACAAAAACTAATTCAATTATCAATCAAACAAAACAAAAACAAAGATCATCATTTACCCTTTTAGATT CTTTGCCAACTTTTTCGTACTTGGTGATATGACCTTTAATCTATTTGTGTCCTTTTTCTTAACATCATGGTTTTCTCGAAGAAAAAAATGTTTTTTTCTA TGGACATGGTTGTATCACTTGTATGATTCGGTTGTTGCAGGGTCTAAGACCCTATAATGTTTCTTTTATTTGTTTGTAATTTTTGTTTTGATTTGGGTTT CTGGGTAAGCTTTATTTAAATTTTAGACCATATATGATTCTAGTTTTTGATGTGTTTGCCATTTGAAGTATACAAATAATTGTTTCTTTATTTATATTTG CATGCGTAACACATACTAACTGTTTTTGAATTGGAATATATGTTGTGAAATTATAATGCCTAGTCCCAGTTCCAATTCCAGTTCTTGTTTTCCACTTGCA AGACAATGTAGGCATTTTGCTGCAAATTTGATGTTTTTGTTTCAGTGTTTGAATATTGTGTCATACAAATTAAGCTTCTTTTGATTAGATTATGATATTA ACTCAACTTCATATGATACATGGATGGTTGTACTGTTTCATGTTGGTTGAGTTTCTTGGTGAATTGAATGGTCGTTAACTTGCAGCTACGCAGAGGCAAC TTGTGTGCAGTGGTTGCCAGAGCATTTTGTTTTACCCTAGAGGCTCACCCAATGTTCGTTGCTCGCTGTGCAACACAGTTACCTCTGTTCCTCCGCCCGA TCTGGAAATTTCTCAACTTTTATGTGGAGGATGTAGTAGAATGCTATTATACGTATGTGGAGCTGCAACTGTGAGTTGTTCCGCTTGCCTCACTATAAAC CGTGTGCCAGCATGTAATCAACTCATCTACATTGATTGTGGGAATTGTCGAACAACACTCATGTTTTCTAATGGAGCTTCCTCCGTTAAATGTGCAATCT GTAACCATGTTACTGTTGTCAGTATGCCCAATGAAATGTTTCTATTTCCTGACGTTAGTCCTAATGGAATGACAAACTCTGCAACAGATTCTTCTACTTC AACATCAATGCCCCAATCTCAGAATCAAACTGTCATAGTAGAAAATCCAATGTCTGTTGATCCAAATGGAAACTTGGTGAGCAATGTTGTTCTTGGCGTT ATAACCGGCAAAAAATAATACCATCATGTTTGAAGAATCCAAAATATGATGTGTTATTAAGTTTGTTGTGCAATGAGGATATTACTTATATATATAATAT AATAATGCAGACTGAAACTGTTTTCCAATACAATAGGAAGATGGATATCATGTCTGAATTGTGTATGAGGAAGCCATGTGAAAAGGGCTTCAAACATGTT TGTGTGTTTGTTATCTCCTACTTTGTTGCCTTTTTATCCATGGCCAATCTATGAGAACCATGTGTTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_3440; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_239864
| Blastp | Protein LOL2 from Oryza sativa with 51.2% of identity |
|---|---|
| Blastx | Protein LOL2 from Oryza sativa with 50% of identity |
| Eggnog | LSD1 zinc finger domain containing protein, expressed(ENOG4111MH5) |
| Kegg | Link to kegg annotations (4352767) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431823.1) |
| Pfam | LSD1 zinc finger (PF06943.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |