Id Trinity | FTRINITY_DN22681_c0_g1_i1 |
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Name Transcript | Ll_transcript_239831 |
Sequence | TTCAATTTCACTCTATATATATACCCATTCTATACATCTCTTTTCTCTCCATAATTTCTCCAACCATTCCCATTTTCCTTTCTCTTTTCGTTTCATTAGT TATATAAACCACTTCTCCAACTAAACCTACATGGACAACCTTAGGTTTAATTCTGCAAGTTCAAATGTAAAAGATTATTATGAGGTTTCAGAATCAAGAA AGCAAGTTTTGGATCATATTATGGAGGCACTGATAGCTCCTAATATCAACATGATTGGAGTGTGTGGAAAGGATGATGATAATATTGCTTCTCTATTACA GAGAGTTATACGGAGAGGTTGGAGGGACAACTTGTTTGGTATGATTGTGATGATAAGAATAGGGGAAAACCCAGACATAAGAAGAATTCAAGAAGAAATT GCTCATGAGATAGGTTGCAGCTTTCAAAGACAAGTTAAACAAGACAAGAAAACCAGATGTTGTGGGTTTAATTATTTTGAGTTTCATAGTGCAAATACTA AGAAGTTTGATACTGAAAATGCTCAACAACTATTTGATAAGATCAGGTCTGTGCCGAAAATTATGTTCATCTTACGTGATGTTAGGAGCAGGCTTGATTT GGGAAAAGTGGGTATTCCATTTGGTGTGGATCACCAAGGTTGTAAATTGATATTCATATCTGAGAGTGATGACATACTATCCAACCATATGAATGCTCAG TGTACATTCATCTTTTGAAGCCTTCCTTGTTAAAAAATCAATTTTGAATTTAATCTGTTATGTAAATTGTTTATGTTTGTGTTGTAACTAAGCACTTAAT CTCTTGTGAGTAAGCGACTTTGTGTTTCTTATTACGCAGTTAAACTCTTTTAAGTTAAAAAAATATAAACTAACTTATGAACAGAAATCAAATCTTATTA ATTAATTCGTTTGAAACACAACATTAAGCCAAACTTAATTATGTTCCCAGTTCAATATAACACAAAAATTCAG BLAST |
Tissue | flowers |
Gene name | LI_gene_3470; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_239831
Blastp | Probable disease resistance protein At5g47260 from Arabidopsis with 20.99% of identity |
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Blastx | Probable disease resistance protein At5g47260 from Arabidopsis with 21.6% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT5G47260) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_003532765.2) |
Pfam | NB-ARC domain (PF00931.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |