| Id Trinity | FTRINITY_DN22725_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_270275 |
| Sequence | GAGACGTAGGATTGATGGGACCGGAGGGTCCCAAAGGAGAAAAAGGAATGTTTGGAGAATACGGATCGGAAGGAGAAAAAGGACCTAGAGGAGATAACGG TCCGCAAGGTATTCAAGGTTTAGAAGGTAGATTTGGAGCGCCCGGTGAGGAAGGATTTCGGGGTCCACCGGGTCTGGATGGTTGCAACGGAACGGACGGT GCAATGGGCATTGACGGTATTCCGGGCAGACCCGGAGAGCGTGGTGCTCCGGGACCAATGGGATTGCAGGGATTTAGGGGCGAGCCTGGCGATGGTGGTG GTAACTCCATGGGTATCAAAGGTAACTACGGTATAATTGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_3497; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_270275
| Blastp | Collagen alpha-2(I) chain from Rattus with 46.02% of identity |
|---|---|
| Blastx | Collagen-like protein 4 from Mimivirus with 38.74% of identity |
| Eggnog | collagen, type(ENOG410ZZWR) |
| Kegg | Link to kegg annotations (84352) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | - |
| Pfam | Collagen triple helix repeat (20 copies) (PF01391.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |