Id Trinity | FTRINITY_DN22887_c0_g1_i2 |
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Name Transcript | Ll_transcript_69907 |
Sequence | GCTTCAGATAATGGTGGATGGTGCAACCCTCCACGAGCCCATTTTGACATGTCTAAACCTGTCTTCATGAAATTTGCTCAGTGGAAAGCTGGCATAGTCC CTGTTATGTACCGCAGAGTGCCATGTTTGAGGAAGGGAGGGATTAGATTTTCATTGCAAGGAAATGGGTACTGGCTATTGGTGTATGTGATGAATGTAGG AGGAGGAGGAGATATATCAAGCATGTTGGTTAAAGGAAGTAGAACAGGTTGGATCAAAATGAGCCATAACTGGGGTGCATCTTATCAAGCATTTGCAACT TTATCTGCCCAAACTCTTTCTTTCAGGATTACTTCATACACAAACAAAGAAACTATTTATGCTTGGAATGTTGCTCCTTCTAGTTGGAACGTGGGGTTAA CTTATTCAGCCAATGTCAACTTCCACTGAAATAGTAATCTACACCTACTATATGATATTGTCTCTTCTCATAAACTCCACTACTACTTGTATGTTTTTAT CTTTTTTTCTTGATCC BLAST |
Tissue | flowers |
Gene name | LI_gene_3563; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_69907
Blastp | Expansin-A7 from Arabidopsis with 69.84% of identity |
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Blastx | Expansin-A18 from Arabidopsis with 71.13% of identity |
Eggnog | atexpa7, exp7, atexp7, athexp alpha 1.26, expa7 atexpa7 (arabidopsis thaliana expansin a7)(ENOG410Y9MB) |
Kegg | Link to kegg annotations (AT1G12560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446514.1) |
Pfam | Pollen allergen (PF01357.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |