| Id Trinity | FTRINITY_DN23497_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_32968 |
| Sequence | CATTCATACTTTGCAGTGCTGGTACTGGTATGGTATCTGGAGCAGCAAATTCTATTAATCAATATCATGAAGTTCCATTTGATGCTCAAATGTCTAGAAC TAAGAATCGGTTACTTGTCCGAGGCATATTAACACCAATACAGGCTCTTACGTTTGCGGCAGTTAGTGGATCATTGGGATTAGTAACTTTATATTATGGC GTAAATCCTGTAACTGCTGCTTTGGGTGCTGCAAATCTGTTTTTATACACATCCATTTATACACCAATGAAACGTCTAAGTATTTTAAATACATGGATTG GTTCAGTAGTTGGTGCGATTCCACCGTTAATGGGATGGGCAGGTTGTACAGGTGGTGTGATAGACTCTGGCGGTTTATTACTCGCTGGTCTACTTTATGC ATGGCAGTTTCCACATTTTAATGCACTTTCTTGGAACCTTAGACCAGATTACTCAAGAGCCGGTTACAGAATGATGTCTGTTACTAATCCAGGTTTATGT AGAAGAACAGCATTACGCTACACTATTGGAGTTTTTGGTCTATGTTGTGCAGCACCATTTTGTGAATTGACTAATATTTATTTTTCAATCGCTGTTTCTC CATTAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_3752; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_32968
| Blastp | Protoheme IX farnesyltransferase, mitochondrial from Mus with 57.56% of identity |
|---|---|
| Blastx | Protoheme IX farnesyltransferase, mitochondrial from Mus with 58.71% of identity |
| Eggnog | Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (By similarity)(COG0109) |
| Kegg | Link to kegg annotations (70383) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020235359.1) |
| Pfam | UbiA prenyltransferase family (PF01040.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |